RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 IQCKQ8N0W5 287 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 CAVIN3Q969G5 261 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 SLC35B4Q969S0 331 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TRIM47Q96LD4 638 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 TRAPPC9Q96Q05 1148 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 DISC1Q9NRI5 854 aa12.2□□□□□ -0.46
CDH4-201ENST00000543233 UTP6Q9NYH9 597 aaKnown RBP12.2□□□□□ -0.46
CDH4-201ENST00000543233 A0A1B0GTH6 734 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 F8VZ95 297 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 ATP6V1C1P21283 382 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 IGBP1P78318 339 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 UBXN1Q04323 297 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 UBE2SQ16763 222 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 SH2D4BQ5SQS7 431 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 TTBK2Q6IQ55 1244 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 LRRC15Q8TF66 581 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 DNAJC9Q8WXX5 260 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 CENPOQ9BU64 300 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 USP40Q9NVE5 1235 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 MARCH6O60337 910 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 PLCG1P19174 1290 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 DRD4P21917 467 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 CTNNA1P35221 906 aaKnown RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 PPP4CP60510 307 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 MAGOHP61326 146 aaKnown RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 ASIC1P78348 528 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 KIAA0753Q2KHM9 967 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 KRT27Q7Z3Y8 459 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 C4orf32Q8N8J7 132 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 UBLCP1Q8WVY7 318 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 MAGOHBQ96A72 148 aaKnown RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 ZNF653Q96CK0 615 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 PCMTD1Q96MG8 357 aaPredicted RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 ADD3Q9UEY8 706 aaKnown RBP12.19□□□□□ -0.46
CDH4-201ENST00000543233 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 DAAM1Q9Y4D1 1078 aa12.19□□□□□ -0.46
CDH4-201ENST00000543233 KCNJ18B7U540 433 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 PPEF1O14829 653 aaPredicted RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 LDHAP00338 332 aaKnown RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 NCALDP61601 193 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 KCNJ12Q14500 433 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 NAALADL2Q58DX5 795 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 HAUS3Q68CZ6 603 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 SMYD1Q8NB12 490 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 IFT74Q96LB3 600 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 LBHD1Q9BQE6 289 aaPredicted RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 TCP11L1Q9NUJ3 509 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 NKX1-2Q9UD57 310 aaPredicted RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 CNOT8Q9UFF9 292 aaKnown RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 TMEM221A6NGB7 291 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 ABLIM1O14639 778 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 CACNA2D1P54289 1103 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 SNAP25P60880 206 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 NFIAQ12857 509 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDH4-201ENST00000543233 CDC37Q16543 378 aaPredicted RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 FOXB2Q5VYV0 432 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 CABP7Q86V35 215 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 MMGT1Q8N4V1 131 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 CERS5Q8N5B7 392 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 TMBIM4Q9HC24 238 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 C6orf50Q9HD87 102 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 ETNK2Q9NVF9 386 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 RABL2BQ9UNT1 228 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 PDS5AQ29RF7 1337 aaKnown RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 TNRC6CQ9HCJ0 1690 aaKnown RBP12.18□□□□□ -0.46
CDH4-201ENST00000543233 BTAF1O14981 1849 aa12.18□□□□□ -0.46
CDH4-201ENST00000543233 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 BTG3Q14201 252 aaPredicted RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 ZNF280DQ6N043 979 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 C16orf86Q6ZW13 317 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 MAP7D3Q8IWC1 876 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 NEDD1Q8NHV4 660 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 CCDC51Q96ER9 411 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 POTEMA6NI47 508 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 SRRM3A6NNA2 597 aaPredicted RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 TDP2O95551 362 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 PENKP01210 267 aaPredicted RBP12.17□□□□□ -0.46
CDH4-201ENST00000543233 FCER1AP12319 257 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 ALADP13716 330 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 IFNAR2P48551 515 aa12.17□□□□□ -0.46
CDH4-201ENST00000543233 RNASE9P60153 205 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms