RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 CYP2J2P51589 502 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 CHMP4BP1P59074 171 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 RAPGEF1Q13905 1077 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 PPP2R5AQ15172 486 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 MAEAQ7L5Y9 396 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 GPR161Q8N6U8 529 aaKnown RBP15.5■□□□□ 0.07
LDB3-207ENST00000542786 GOLGA1Q92805 767 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 DRC1Q96MC2 740 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 EPC1Q9H2F5 836 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 MLXIPQ9HAP2 919 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 HDAC6Q9UBN7 1215 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 CAPN6Q9Y6Q1 641 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 DOCK5Q9H7D0 1870 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 A0A0G2JLL6 359 aaPredicted RBP15.5■□□□□ 0.07
LDB3-207ENST00000542786 IRF6O14896 467 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 PRKCIP41743 596 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 FMO5P49326 533 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 CLCN6P51797 869 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 FSTL1Q12841 308 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 ASIC2Q16515 512 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 XKR9Q5GH70 373 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 ABHD15Q6UXT9 468 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 PRRT2Q7Z6L0 340 aaPredicted RBP15.5■□□□□ 0.07
LDB3-207ENST00000542786 RIOX2Q8IUF8 465 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 FAM133AQ8N9E0 248 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 SECISBP2LQ93073 1101 aaKnown RBP15.5■□□□□ 0.07
LDB3-207ENST00000542786 ACCSQ96QU6 501 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 IWS1Q96ST2 819 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 FAM53CQ9NYF3 392 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 GCNT4Q9P109 453 aa15.5■□□□□ 0.07
LDB3-207ENST00000542786 MACROD2A1Z1Q3 448 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 MAGEA1P43355 309 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 SP2Q02086 613 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 CNTN2Q02246 1040 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 SLC18A3Q16572 532 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 CBWD6Q4V339 395 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 TDRD12Q587J7 1177 aaKnown RBP15.49■□□□□ 0.07
LDB3-207ENST00000542786 CBWD3Q5JTY5 395 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 CBWD5Q5RIA9 395 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 C1orf220Q5T0J3 134 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 TEX35Q5T0J7 233 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 TCERG1LQ5VWI1 586 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 IQCEQ6IPM2 695 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 SULF1Q8IWU6 871 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 BSNDQ8WZ55 320 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 DCPSQ96C86 337 aaKnown RBP15.49■□□□□ 0.07
LDB3-207ENST00000542786 CDHR1Q96JP9 859 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 DEF6Q9H4E7 631 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 TMEM206Q9H813 350 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 JPH1Q9HDC5 661 aaPredicted RBP15.49■□□□□ 0.07
LDB3-207ENST00000542786 GABBR1Q9UBS5 961 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 IGSF9BQ9UPX0 1349 aa15.49■□□□□ 0.07
LDB3-207ENST00000542786 A0A087X0T9 212 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 ENC1O14682 589 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 CNMDO75829 334 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 FAM228BP0C875 321 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 TRIM49P0CI25 452 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 TRIM49CP0CI26 452 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 EDNRBP24530 442 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 ACTR2P61160 394 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 SNRPFP62306 86 aaKnown RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 PLS1Q14651 629 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 GJB7Q6PEY0 223 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 CCDC60Q8IWA6 550 aaPredicted RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 PROCA1Q8NCQ7 364 aaPredicted RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 TMEM161BQ8NDZ6 487 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 DNERQ8NFT8 737 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 LMO3Q8TAP4 145 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 L3MBTL3Q96JM7 780 aaPredicted RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 CLMNQ96JQ2 1002 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 CBWD1Q9BRT8 395 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 SLC9A2Q9UBY0 812 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 PUF60Q9UHX1 559 aaKnown RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 DDX41Q9UJV9 622 aaKnown RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 FRMD4BQ9Y2L6 1034 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 CSADQ9Y600 493 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 SPDYE5A6NIY4 337 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 MAPK13O15264 365 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 SLC16A4O15374 487 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 PTK2Q05397 1052 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 KLHL30Q0D2K2 578 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 BFSP1Q12934 665 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 MOGSQ13724 837 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.48■□□□□ 0.07
LDB3-207ENST00000542786 ZNF571Q7Z3V5 609 aaPredicted RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 SYCP3Q8IZU3 236 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 MSANTD4Q8NCY6 345 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 PLEKHO2Q8TD55 490 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 ZNF526Q8TF50 670 aaPredicted RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 SPIRE2Q8WWL2 714 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 ATP6V0A1Q93050 837 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 NTPCRQ9BSD7 190 aaKnown RBP15.48■□□□□ 0.07
LDB3-207ENST00000542786 XPNPEP1Q9NQW7 623 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 TCEAL9Q9UHQ7 104 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 KCNH4Q9UQ05 1017 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 PFASO15067 1338 aa15.48■□□□□ 0.07
LDB3-207ENST00000542786 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
LDB3-207ENST00000542786 ZRANB2O95218 330 aaKnown RBP eCLIP15.47■□□□□ 0.07
LDB3-207ENST00000542786 ATG7O95352 703 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms