RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SLC16A4O15374 487 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 NRDCO43847 1150 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 SNAI1O95863 264 aaPredicted RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 GYPCP04921 128 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 RPL13P26373 211 aaKnown RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 CASP14P31944 242 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 CLCN1P35523 988 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 FKBP15Q5T1M5 1219 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 ZC3H3Q8IXZ2 948 aaKnown RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 NPLOC4Q8TAT6 608 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 ATP6V0A4Q9HBG4 840 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 PDLIM7Q9NR12 457 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 NRBP2Q9NSY0 501 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 ZMYM2Q9UBW7 1377 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 TLR2O60603 784 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 AKAP3O75969 853 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 TPM1P09493 284 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 MARK3P27448 753 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 NPTX2P47972 431 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCG3-202ENST00000542355 SMTNP53814 917 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 SYCP1Q15431 976 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 GJC2Q5T442 439 aaPredicted RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 C17orf99Q6UX52 265 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 MAMDC4Q6UXC1 1216 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 HS2ST1Q7LGA3 356 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 AFAP1L1Q8TED9 768 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 KIFAP3Q92845 792 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 NIFKQ9BYG3 293 aaKnown RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 GBP3Q9H0R5 595 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 VTA1Q9NP79 307 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
SCG3-202ENST00000542355 DIS3Q9Y2L1 958 aaKnown RBP12.11□□□□□ -0.47
SCG3-202ENST00000542355 UBE4BO95155 1302 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 ADGRA2Q96PE1 1338 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 TMEM88BA6NKF7 163 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 KLK7P49862 253 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
SCG3-202ENST00000542355 AMHR2Q16671 573 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 TRIM50Q86XT4 487 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 ZIC5Q96T25 663 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 BAG1Q99933 345 aaPredicted RBP12.1□□□□□ -0.47
SCG3-202ENST00000542355 TINF2Q9BSI4 451 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 KIFC3Q9BVG8 833 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 TMEM206Q9H813 350 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 KMT5AQ9NQR1 393 aa12.1□□□□□ -0.47
SCG3-202ENST00000542355 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCG3-202ENST00000542355 RNF225M0QZC1 329 aaPredicted RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 CASP4P49662 377 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 MARSP56192 900 aaKnown RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 GTF2BQ00403 316 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 ALCAMQ13740 583 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 TRIM59Q8IWR1 403 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 CCDC155Q8N6L0 562 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 CCDC112Q8NEF3 446 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 SLC7A3Q8WY07 619 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 BSNDQ8WZ55 320 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 ACCSQ96QU6 501 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 ZFYVE28Q9HCC9 887 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 AGPAT3Q9NRZ7 376 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 SLC5A4Q9NY91 659 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 MFAP3LO75121 409 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 NCKAP1LP55160 1127 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 SREBF2Q12772 1141 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 LAMC2Q13753 1193 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 EMC2Q15006 297 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 PLPPR4Q7Z2D5 763 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 FRMD5Q7Z6J6 570 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 TMEM143Q96AN5 459 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 ERGIC2Q96RQ1 377 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 NTPCRQ9BSD7 190 aaKnown RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 KATNBL1Q9H079 304 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 POLR3FQ9H1D9 316 aaPredicted RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 ST6GALNAC4Q9H4F1 302 aa12.09□□□□□ -0.47
SCG3-202ENST00000542355 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 ARMCX3Q9UH62 379 aaPredicted RBP12.09□□□□□ -0.47
SCG3-202ENST00000542355 DOCK5Q9H7D0 1870 aa12.08□□□□□ -0.48
SCG3-202ENST00000542355 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
SCG3-202ENST00000542355 TTC26A0AVF1 554 aa12.08□□□□□ -0.48
SCG3-202ENST00000542355 CARNS1A5YM72 827 aa12.08□□□□□ -0.48
SCG3-202ENST00000542355 RASSF10A6NK89 507 aa12.08□□□□□ -0.48
SCG3-202ENST00000542355 LGR5O75473 907 aa12.08□□□□□ -0.48
SCG3-202ENST00000542355 EPB41P11171 864 aaKnown RBP12.08□□□□□ -0.48
SCG3-202ENST00000542355 TRIM21P19474 475 aaKnown RBP12.08□□□□□ -0.48
SCG3-202ENST00000542355 KRT9P35527 623 aa12.08□□□□□ -0.48
SCG3-202ENST00000542355 CYP2J2P51589 502 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms