RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	EGFR	P00533	1210 aa		13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	TCF7	P36402	384 aa	Predicted RBP	13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	RNASEL	Q05823	741 aa	Known RBP	13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	CFAP58	Q5T655	872 aa		13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	TWF2	Q6IBS0	349 aa	Known RBP	13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	ABHD16B	Q9H3Z7	469 aa		13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	DNAJC18	Q9H819	358 aa		13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	VTA1	Q9NP79	307 aa		13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.44	□□□□□ -0.26
ABCB8-222	ENST00000542328	ARHGEF37	A1IGU5	675 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	NR3C1	P04150	777 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	MFAP3	P55082	362 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	BPIFB4	P59827	614 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CALCOCO2	Q13137	446 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	DNAJC21	Q5F1R6	531 aa	Known RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	NOL9	Q5SY16	702 aa	Known RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	HDX	Q7Z353	690 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	METTL16	Q86W50	562 aa	Known RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	RNF149	Q8NC42	400 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CCDC26	Q8TAB7	109 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	FOXN1	O15353	648 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	GLT1D1	Q96MS3	346 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	SH2D3A	Q9BRG2	576 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CALCOCO1	Q9P1Z2	691 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	ATP2A1	O14983	1001 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	OAT	P04181	439 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CNTN2	Q02246	1040 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CATSPER3	Q86XQ3	398 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	NAP1L3	Q99457	506 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	VPS18	Q9P253	973 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	HESX1	Q9UBX0	185 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	MTRF1L	Q9UGC7	380 aa	Known RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	IGKV6D-41	A0A0C4DH26	115 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	SMIM23	A6NLE4	172 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CDC25B	P30305	580 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	EMC2	Q15006	297 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	RPS6KA1	Q15418	735 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	PEX26	Q7Z412	305 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	IPO4	Q8TEX9	1081 aa	Known RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	U2AF1L4	Q8WU68	220 aa	Known RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CCDC114	Q96M63	670 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	SAR1B	Q9Y6B6	198 aa		13.43	□□□□□ -0.26
ABCB8-222	ENST00000542328	TJP1	Q07157	1748 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	SUPT20HL2	P0C7V6	817 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	SPRYD7	Q5W111	196 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	PLA2G4F	Q68DD2	849 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	METTL7B	Q6UX53	244 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	ANKRD23	Q86SG2	305 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	AGO4	Q9HCK5	861 aa	Known RBP	13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	MYMK	A6NI61	221 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	ZBTB22	O15209	634 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	ABCB4	P21439	1286 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	LACTB	P83111	547 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	TMEM132B	Q14DG7	1078 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	MICALCL	Q6ZW33	695 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	ARMCX2	Q7L311	632 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	ATRIP	Q8WXE1	791 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	NDST4	Q9H3R1	872 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	HAUS4	Q9H6D7	363 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	AFG3L2	Q9Y4W6	797 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	GRIN1	Q05586	938 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	IER5	Q5VY09	327 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	REM2	Q8IYK8	340 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	SHCBP1	Q8NEM2	672 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	TMEM143	Q96AN5	459 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	ZNF668	Q96K58	619 aa	Predicted RBP	13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	REEP2	Q9BRK0	252 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	SNCAIP	Q9Y6H5	919 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	UBR2	Q8IWV8	1755 aa		13.42	□□□□□ -0.26
ABCB8-222	ENST00000542328	SLC15A5	A6NIM6	579 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	PIK3CD	O00329	1044 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	GAS2	O43903	313 aa	Known RBP	13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	CAPN2	P17655	700 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	SLC26A2	P50443	739 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	KIAA1524	Q8TCG1	905 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	TRIM31	Q9BZY9	425 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	CYP39A1	Q9NYL5	469 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	CYP3A4	P08684	503 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	CYP2C9	P11712	490 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	NPEPPS	P55786	919 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	PTK2	Q05397	1052 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	MYO1E	Q12965	1108 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	ERCC6L	Q2NKX8	1250 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	DCUN1D2	Q6PH85	259 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	KLHL7	Q8IXQ5	586 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	UBL4B	Q8N7F7	174 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	MYO1A	Q9UBC5	1043 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	ADAMTS7	Q9UKP4	1686 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	UNCX	A6NJT0	531 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	CYP11B2	P19099	503 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	PDE6C	P51160	858 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	TREML2	Q5T2D2	321 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	PLS3	P13797	630 aa		13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	NMT1	P30419	496 aa	Known RBP	13.41	□□□□□ -0.26
ABCB8-222	ENST00000542328	RBL2	Q08999	1139 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms