RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 HGSNATQ68CP4 663 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 SMAP1Q8IYB5 467 aaPredicted RBP18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 GANQ9H2C0 597 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 XPNPEP1Q9NQW7 623 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 FBXO40Q9UH90 709 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 USP20Q9Y2K6 914 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 SYNGAP1Q96PV0 1343 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 LOXHD1Q8IVV2 1947 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 ARIH2O95376 493 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 EDNRBP24530 442 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 PON1P27169 355 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 HS2ST1Q7LGA3 356 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 SLC35F6Q8N357 371 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 CDHR1Q96JP9 859 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 ADGRA3Q8IWK6 1321 aa18.91■□□□□ 0.62
TMEM50B-210ENST00000542230 CCDC169A6NNP5 214 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 SLC16A3O15427 465 aaKnown RBP18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 LRRN2O75325 713 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 PSMC2P35998 433 aaKnown RBP18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 NPTX2P47972 431 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 DLG4P78352 724 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 RDM1Q8NG50 284 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 EFCC1Q9HA90 598 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 MCM3APO60318 1980 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 IQCA1LA6NCM1 817 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 SUPT20HL2P0C7V6 817 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 PNMA6AP0CW24 399 aaPredicted RBP18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 MTERF2Q49AM1 385 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 CBWD6Q4V339 395 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 CBWD3Q5JTY5 395 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 CBWD5Q5RIA9 395 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 ATP6V0A1Q93050 837 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 CCDC42Q96M95 316 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 PCYT2Q99447 389 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 CEP72Q9P209 647 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 FHOD1Q9Y613 1164 aa18.9■□□□□ 0.62
TMEM50B-210ENST00000542230 ANKRD63C9JTQ0 380 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 TULP1O00294 542 aaPredicted RBP18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 STAM2O75886 525 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 ICAM3P32942 547 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 MYH9P35579 1960 aaKnown RBP18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 TMEM161BQ8NDZ6 487 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 SIX2Q9NPC8 291 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 CYP26B1Q9NR63 512 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 GSTTP1A0A1W2PQM5 241 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 KIF5CO60282 957 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 EXOC3O60645 756 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 FARP2O94887 1054 aaPredicted RBP18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 GTF2BQ00403 316 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 EXOC3L4Q17RC7 722 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 DRC1Q96MC2 740 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 PDLIM7Q9NR12 457 aa18.89■□□□□ 0.61
TMEM50B-210ENST00000542230 UBE4BO95155 1302 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 GOLGA8IPA6NC78 632 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 GOLGA8JA6NMD2 632 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 ADSSP30520 456 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 KIF11P52732 1056 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 CDK17Q00537 523 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 GFPT1Q06210 699 aaPredicted RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 SNAPC2Q13487 334 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 RAPGEF1Q13905 1077 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 MIS18BP1Q6P0N0 1132 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 STXBP4Q6ZWJ1 553 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 FASTKD5Q7L8L6 764 aaKnown RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 PNMA8AQ86V59 439 aaPredicted RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 METTL14Q9HCE5 456 aaKnown RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 EIF3CLB5ME19 914 aaKnown RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 SLU7O95391 586 aaKnown RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 TUBB4AP04350 444 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 NCKAP1LP55160 1127 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 KLHDC7AQ5VTJ3 777 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 OTUD6AQ7L8S5 288 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 PLEKHO2Q8TD55 490 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 TMEM143Q96AN5 459 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 EIF3CQ99613 913 aaKnown RBP18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 GCNT4Q9P109 453 aa18.88■□□□□ 0.61
TMEM50B-210ENST00000542230 SCN4AP35499 1836 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 ATG7O95352 703 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 UCHL3P15374 230 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 CYLC1P35663 651 aaPredicted RBP18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 ERVK-9P63128 1117 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 NFIL3Q16649 462 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 ASTE1Q2TB18 679 aaPredicted RBP18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 CCDC122Q5T0U0 273 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 DNAAF5Q86Y56 855 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 FBXO16Q8IX29 292 aaPredicted RBP18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 COPS5Q92905 334 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 MS4A4AQ96JQ5 239 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 CARD6Q9BX69 1037 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 ZNF302Q9NR11 478 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 FRMD4BQ9Y2L6 1034 aa18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 MAFBQ9Y5Q3 323 aaPredicted RBP18.87■□□□□ 0.61
TMEM50B-210ENST00000542230 DENND3A2RUS2 1198 aa18.86■□□□□ 0.61
TMEM50B-210ENST00000542230 GGPS1O95749 300 aa18.86■□□□□ 0.61
TMEM50B-210ENST00000542230 OSBPP22059 807 aa18.86■□□□□ 0.61
TMEM50B-210ENST00000542230 KIAA1328Q86T90 577 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms