RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 SLC17A8Q8NDX2 589 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 VPS37BQ9H9H4 285 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 ADD3Q9UEY8 706 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 DLC1Q96QB1 1528 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 GYPCP04921 128 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 ERFP50548 548 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 ALDH5A1P51649 535 aaPredicted RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 GPATCH4Q5T3I0 446 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 RFX8Q6ZV50 586 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 PRCCQ92733 491 aaPredicted RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 NDNQ99608 321 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
KDM3A-216ENST00000542128 AMNQ9BXJ7 453 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 UBXN6Q9BZV1 441 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 TFR2Q9UP52 801 aa13.36□□□□□ -0.27
KDM3A-216ENST00000542128 KDM1AO60341 852 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 CAMTA2O94983 1202 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 TNFAIP3P21580 790 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 LCORLQ8N3X6 602 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 FNBP1Q96RU3 617 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 FAM170AA1A519 330 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 DAPK3O43293 454 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 CASP1P29466 404 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 GRIK3Q13003 919 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 KLC3Q6P597 504 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 NMD3Q96D46 503 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 DNAJC17Q9NVM6 304 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 CYP2D7A0A087X1C5 515 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 SART1O43290 800 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 PRPF6O94906 941 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 VIL1P09327 827 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 SLC16A2P36021 539 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 POLA2Q14181 598 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 Q3C1V9 767 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 TTMPQ5BVD1 217 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 C9orf131Q5VYM1 1079 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 ZNF354CQ86Y25 554 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 FANCBQ8NB91 859 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 SNX29Q8TEQ0 813 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 U2AF1L4Q8WU68 220 aaKnown RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 C17orf50Q8WW18 174 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 ERP27Q96DN0 273 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 ATXN10Q9UBB4 475 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 LGALS16A8MUM7 142 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 NDC80O14777 642 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 LIN7AO14910 233 aaPredicted RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 S100BP04271 92 aaPredicted RBP13.35□□□□□ -0.27
KDM3A-216ENST00000542128 ABCB4P21439 1286 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 IGBP1P78318 339 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 SV2BQ7L1I2 683 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 NDEL1Q9GZM8 345 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 TMBIM4Q9HC24 238 aa13.35□□□□□ -0.27
KDM3A-216ENST00000542128 ACSL3O95573 720 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 EPB41P11171 864 aaKnown RBP13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ZNF157P51786 506 aaPredicted RBP13.34□□□□□ -0.27
KDM3A-216ENST00000542128 PMS2P54278 862 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 AP2B1P63010 937 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 DR1Q01658 176 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 BLMHQ13867 455 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 PRR16Q569H4 304 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 TPH2Q8IWU9 490 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 MAB21L3Q8N8X9 362 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 FAM161BQ96MY7 647 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 CCDC68Q9H2F9 335 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 BCAP29Q9UHQ4 241 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
KDM3A-216ENST00000542128 RASSF9O75901 435 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 BRAFP15056 766 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 HUNKP57058 714 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ZMYM1Q5SVZ6 1142 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 AENQ8WTP8 325 aaKnown RBP13.34□□□□□ -0.27
KDM3A-216ENST00000542128 GRAMD1AQ96CP6 724 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 PAGE5Q96GU1 130 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 DMAP1Q9NPF5 467 aaPredicted RBP13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ITGB1BP2Q9UKP3 347 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 LRCH1Q9Y2L9 728 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 PASKQ96RG2 1323 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 POC1B-GALNT4F8VUJ3 575 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ORC4O43929 436 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ATP9AO75110 1047 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 LMNB1P20700 586 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ADD2P35612 726 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 HSD17B3P37058 310 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 MLH1P40692 756 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 ZNF658Q5TYW1 1059 aaPredicted RBP13.34□□□□□ -0.27
KDM3A-216ENST00000542128 HIPK4Q8NE63 616 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 COA7Q96BR5 231 aa13.34□□□□□ -0.27
KDM3A-216ENST00000542128 PTPN22Q9Y2R2 807 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms