RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 ZSCAN31Q96LW9 406 aaPredicted RBP19.56■□□□□ 0.72
TRPT1-212ENST00000542040 C1QTNF1Q9BXJ1 281 aa19.56■□□□□ 0.72
TRPT1-212ENST00000542040 TMEM117Q9H0C3 514 aa19.56■□□□□ 0.72
TRPT1-212ENST00000542040 ZSWIM4Q9H7M6 989 aa19.56■□□□□ 0.72
TRPT1-212ENST00000542040 SUCLA2Q9P2R7 463 aaPredicted RBP19.56■□□□□ 0.72
TRPT1-212ENST00000542040 PRUNE2Q8WUY3 3088 aa19.56■□□□□ 0.72
TRPT1-212ENST00000542040 PRRC2BQ5JSZ5 2229 aaKnown RBP19.56■□□□□ 0.72
TRPT1-212ENST00000542040 CHD7Q9P2D1 2997 aa19.56■□□□□ 0.72
TRPT1-212ENST00000542040 GRM6O15303 877 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 SLC37A4O43826 429 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 LAG3P18627 525 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 POLGP54098 1239 aaPredicted RBP19.55■□□□□ 0.72
TRPT1-212ENST00000542040 MICAL1Q8TDZ2 1067 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 GJA10Q969M2 543 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 CEP170P1Q96L14 293 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 CCDC43Q96MW1 224 aaKnown RBP19.55■□□□□ 0.72
TRPT1-212ENST00000542040 CYP26B1Q9NR63 512 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 CLDND1Q9NY35 253 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 PCDHA12Q9UN75 941 aa19.55■□□□□ 0.72
TRPT1-212ENST00000542040 MYH9P35579 1960 aaKnown RBP19.55■□□□□ 0.72
TRPT1-212ENST00000542040 TTC3P53804 2025 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 ASAP2O43150 1006 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 CTDNEP1O95476 244 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 KRT17Q04695 432 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 NCBP1Q09161 790 aaKnown RBP19.54■□□□□ 0.72
TRPT1-212ENST00000542040 CALCRLQ16602 461 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 NCAPH2Q6IBW4 605 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 PTCRAQ6ISU1 281 aaPredicted RBP19.54■□□□□ 0.72
TRPT1-212ENST00000542040 RHPN2Q8IUC4 686 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 C4orf19Q8IY42 314 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 THNSL1Q8IYQ7 743 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 KLHL23Q8NBE8 558 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 NSUN7Q8NE18 718 aaKnown RBP19.54■□□□□ 0.72
TRPT1-212ENST00000542040 NEK9Q8TD19 979 aa19.54■□□□□ 0.72
TRPT1-212ENST00000542040 LLPHQ9BRT6 129 aaKnown RBP19.54■□□□□ 0.72
TRPT1-212ENST00000542040 MRPL9Q9BYD2 267 aaKnown RBP19.54■□□□□ 0.72
TRPT1-212ENST00000542040 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
TRPT1-212ENST00000542040 COL4A4P53420 1690 aaPredicted RBP19.53■□□□□ 0.72
TRPT1-212ENST00000542040 IGKV6-21A0A0C4DH24 114 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 MGEA5O60502 916 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 SRGAP2BP0DMP2 458 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 PPM1AP35813 382 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
TRPT1-212ENST00000542040 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
TRPT1-212ENST00000542040 DSC3Q14574 896 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 LRRC43Q8N309 656 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 SPPL3Q8TCT6 385 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 POF1BQ8WVV4 589 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 SH2B1Q9NRF2 756 aaPredicted RBP19.53■□□□□ 0.72
TRPT1-212ENST00000542040 VAV3Q9UKW4 847 aa19.53■□□□□ 0.72
TRPT1-212ENST00000542040 RALGAPA2Q2PPJ7 1873 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 A0A0U1RQF3 1178 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 YWHABP31946 246 aaKnown RBP19.52■□□□□ 0.72
TRPT1-212ENST00000542040 RAB27AP51159 221 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 FAM102BQ5T8I3 360 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 ANO5Q75V66 913 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 ECHDC2Q86YB7 292 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 DIS3L2Q8IYB7 885 aaKnown RBP19.52■□□□□ 0.72
TRPT1-212ENST00000542040 FAM184AQ8NB25 1140 aa19.52■□□□□ 0.72
TRPT1-212ENST00000542040 PSPC1Q8WXF1 523 aaKnown RBP19.52■□□□□ 0.72
TRPT1-212ENST00000542040 UPF2Q9HAU5 1272 aaKnown RBP19.52■□□□□ 0.72
TRPT1-212ENST00000542040 TYW1Q9NV66 732 aaKnown RBP19.52■□□□□ 0.72
TRPT1-212ENST00000542040 NEMFO60524 1076 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 ITGB1P05556 798 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 LINC00271P0C7V0 271 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 FDPSP14324 419 aaKnown RBP19.51■□□□□ 0.71
TRPT1-212ENST00000542040 NR5A1Q13285 461 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 PCBP1Q15365 356 aaKnown RBP eCLIP19.51■□□□□ 0.71
TRPT1-212ENST00000542040 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
TRPT1-212ENST00000542040 CATSPER4Q7RTX7 472 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 SRGAP1Q7Z6B7 1085 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 TPH2Q8IWU9 490 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 RNF169Q8NCN4 708 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 PGBD4Q96DM1 585 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 CDCA3Q99618 268 aaPredicted RBP19.51■□□□□ 0.71
TRPT1-212ENST00000542040 LXNQ9BS40 222 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 IGFLR1Q9H665 355 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 PRKAG3Q9UGI9 489 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 LZTS1Q9Y250 596 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 KIF3AQ9Y496 699 aa19.51■□□□□ 0.71
TRPT1-212ENST00000542040 A0A087WZ62 844 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 GRXCR2A6NFK2 248 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 BTBD18B2RXH4 712 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 EML1O00423 815 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 SSTR3P32745 418 aaPredicted RBP19.5■□□□□ 0.71
TRPT1-212ENST00000542040 ORC2Q13416 577 aaPredicted RBP19.5■□□□□ 0.71
TRPT1-212ENST00000542040 TFDP1Q14186 410 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 MXD4Q14582 209 aaPredicted RBP19.5■□□□□ 0.71
TRPT1-212ENST00000542040 COL19A1Q14993 1142 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 XKR9Q5GH70 373 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 COLGALT1Q8NBJ5 622 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.5■□□□□ 0.71
TRPT1-212ENST00000542040 HAS1Q92839 578 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 NLRP4Q96MN2 994 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 ZNF558Q96NG5 402 aa19.5■□□□□ 0.71
TRPT1-212ENST00000542040 POP1Q99575 1024 aaKnown RBP19.5■□□□□ 0.71
TRPT1-212ENST00000542040 FDXACB1Q9BRP7 624 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms