RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 ATN1P54259 1190 aaPredicted RBP30.72■■■□□ 2.51
CCM2-218ENST00000541586 PMS1P54277 932 aaKnown RBP30.72■■■□□ 2.51
CCM2-218ENST00000541586 PRKCEQ02156 737 aa30.72■■■□□ 2.51
CCM2-218ENST00000541586 PLCB4Q15147 1175 aa30.72■■■□□ 2.51
CCM2-218ENST00000541586 HSP90AA4PQ58FG1 418 aa30.72■■■□□ 2.51
CCM2-218ENST00000541586 FAM47CQ5HY64 1035 aa30.72■■■□□ 2.51
CCM2-218ENST00000541586 GLIS3Q8NEA6 775 aa30.72■■■□□ 2.51
CCM2-218ENST00000541586 RSPH10B2B2RC85 870 aa30.71■■■□□ 2.51
CCM2-218ENST00000541586 RSPH10BP0C881 870 aa30.71■■■□□ 2.51
CCM2-218ENST00000541586 RARRES1P49788 294 aa30.71■■■□□ 2.51
CCM2-218ENST00000541586 ITGA7Q13683 1181 aa30.71■■■□□ 2.51
CCM2-218ENST00000541586 TBC1D7Q9P0N9 293 aa30.71■■■□□ 2.51
CCM2-218ENST00000541586 TRIM49BA6NDI0 452 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 DKC1O60832 514 aaKnown RBP eCLIP30.7■■■□□ 2.51
CCM2-218ENST00000541586 CAPN2P17655 700 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 SLC26A2P50443 739 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 FANCCQ00597 558 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 GUF1Q8N442 669 aaKnown RBP30.7■■■□□ 2.51
CCM2-218ENST00000541586 SH2D3AQ9BRG2 576 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 C11orf49Q9H6J7 331 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 WDR81Q562E7 1941 aa30.7■■■□□ 2.51
CCM2-218ENST00000541586 TMEM150BA6NC51 233 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 HAS3O00219 553 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 TBCAO75347 108 aaKnown RBP30.7■■■□□ 2.5
CCM2-218ENST00000541586 TPD52L1Q16890 204 aaPredicted RBP30.7■■■□□ 2.5
CCM2-218ENST00000541586 PADI6Q6TGC4 694 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 NECAB2Q7Z6G3 386 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 C7orf31Q8N865 590 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 P2RX5Q93086 422 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 MRFAP1L1Q96HT8 127 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 FGFBP2Q9BYJ0 223 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 POLD4Q9HCU8 107 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 NRBP2Q9NSY0 501 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 COL4A3BPQ9Y5P4 624 aa30.7■■■□□ 2.5
CCM2-218ENST00000541586 MYH9P35579 1960 aaKnown RBP30.7■■■□□ 2.5
CCM2-218ENST00000541586 GRIN2DO15399 1336 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 OATP04181 439 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 CCNE1P24864 410 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 GUCY2CP25092 1073 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 IGBP1P78318 339 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 CDKAL1Q5VV42 579 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 SFR1Q86XK3 245 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 ANKEF1Q9NU02 776 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 IFNKQ9P0W0 207 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 HDAC6Q9UBN7 1215 aa30.69■■■□□ 2.5
CCM2-218ENST00000541586 SEPT9Q9UHD8 586 aaPredicted RBP30.69■■■□□ 2.5
CCM2-218ENST00000541586 TTI2Q6NXR4 508 aa30.68■■■□□ 2.5
CCM2-218ENST00000541586 ATP8B4Q8TF62 1192 aa30.68■■■□□ 2.5
CCM2-218ENST00000541586 SMIM10L2AP0DMW4 78 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 SMIM10L2BP0DMW5 78 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 CDK11BP21127 795 aaKnown RBP30.67■■■□□ 2.5
CCM2-218ENST00000541586 XKR3Q5GH77 459 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 ANO5Q75V66 913 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 BBXQ8WY36 941 aaPredicted RBP30.67■■■□□ 2.5
CCM2-218ENST00000541586 SETD4Q9NVD3 440 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 ODF2LQ9ULJ1 636 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 A0A0U1RQG5 324 aaPredicted RBP30.67■■■□□ 2.5
CCM2-218ENST00000541586 BICDL2A1A5D9 508 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 HBP1O60381 514 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 FAM13AO94988 1023 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 STBD1O95210 358 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 SERPINC1P01008 464 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 INSRRP14616 1297 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 GAP43P17677 238 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 PLA2G4FQ68DD2 849 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 CENPPQ6IPU0 288 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.67■■■□□ 2.5
CCM2-218ENST00000541586 MYOCDQ8IZQ8 938 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 FAM167AQ96KS9 214 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 CCDC43Q96MW1 224 aaKnown RBP30.67■■■□□ 2.5
CCM2-218ENST00000541586 XPO4Q9C0E2 1151 aaKnown RBP30.67■■■□□ 2.5
CCM2-218ENST00000541586 SEMA6BQ9H3T3 888 aa30.67■■■□□ 2.5
CCM2-218ENST00000541586 COL6A1P12109 1028 aa30.66■■■□□ 2.5
CCM2-218ENST00000541586 ANKRD40Q6AI12 368 aa30.66■■■□□ 2.5
CCM2-218ENST00000541586 SLC39A5Q6ZMH5 540 aa30.66■■■□□ 2.5
CCM2-218ENST00000541586 SFI1A8K8P3 1242 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 CDC25BP30305 580 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 NPEPPSP55786 919 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 PPFIA1Q13136 1202 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 XKR9Q5GH70 373 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 OTUD6AQ7L8S5 288 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 TRAPPC12Q8WVT3 735 aa30.65■■■□□ 2.5
CCM2-218ENST00000541586 DUSP9Q99956 384 aaKnown RBP30.65■■■□□ 2.5
CCM2-218ENST00000541586 ZNF131P52739 623 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 MTERF2Q49AM1 385 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 PARVGQ9HBI0 331 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 ARVCFO00192 962 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 USO1O60763 962 aaKnown RBP30.64■■■□□ 2.5
CCM2-218ENST00000541586 HIP1RO75146 1068 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 UBASH3AP57075 661 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 ZNF200P98182 395 aaPredicted RBP30.64■■■□□ 2.5
CCM2-218ENST00000541586 NFRKBQ6P4R8 1299 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 MYCT1Q8N699 235 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 SPC24Q8NBT2 197 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 SCFD1Q8WVM8 642 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 CEP170P1Q96L14 293 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 OLFML3Q9NRN5 406 aa30.64■■■□□ 2.5
CCM2-218ENST00000541586 SCN10AQ9Y5Y9 1956 aa30.63■■■□□ 2.49
CCM2-218ENST00000541586 CASP5P51878 434 aa30.63■■■□□ 2.49
CCM2-218ENST00000541586 MAPK7Q13164 816 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms