RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 MARCH8Q5T0T0 291 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 KANK3Q6NY19 840 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 DDX53Q86TM3 631 aaKnown RBP10.9□□□□□ -0.66
YBX3-211ENST00000541351 ZCCHC14Q8WYQ9 949 aaKnown RBP10.9□□□□□ -0.66
YBX3-211ENST00000541351 ADAM33Q9BZ11 813 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 BCAS3Q9H6U6 928 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 PIDD1Q9HB75 910 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 LTB4R2Q9NPC1 389 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 HCSTQ9UBK5 93 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 ST3GAL5Q9UNP4 418 aa10.9□□□□□ -0.66
YBX3-211ENST00000541351 LOXHD1Q8IVV2 1947 aa10.9□□□□□ -0.67
YBX3-211ENST00000541351 TRIM6-TRIM34B2RNG4 842 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 ANHXE9PGG2 379 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 KCNK5O95279 499 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 FGRP09769 529 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 GOLGA8HP0CJ92 632 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 INSRRP14616 1297 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 METAP2P50579 478 aaKnown RBP eCLIP10.89□□□□□ -0.673e-11■■■□□ 14.6
YBX3-211ENST00000541351 SNW1Q13573 536 aaKnown RBP10.89□□□□□ -0.67
YBX3-211ENST00000541351 HTR4Q13639 388 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 LPAL2Q16609 132 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 SLC44A4Q53GD3 710 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 ZNF852Q6ZMS4 543 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 MAMSTRQ6ZN01 415 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 ZNF710Q8N1W2 664 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
YBX3-211ENST00000541351 GPKOWQ92917 476 aaPredicted RBP eCLIP10.89□□□□□ -0.67
YBX3-211ENST00000541351 CLDN23Q96B33 292 aa10.89□□□□□ -0.67
YBX3-211ENST00000541351 ASH1LQ9NR48 2969 aaKnown RBP10.89□□□□□ -0.67
YBX3-211ENST00000541351 CCDC195A0A1B0GUA6 201 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 MAST4O15021 2626 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 MGEA5O60502 916 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 LRRN2O75325 713 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 ADH1AP07327 375 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 PARP1P09874 1014 aaKnown RBP10.88□□□□□ -0.67
YBX3-211ENST00000541351 HOXA13P31271 388 aaPredicted RBP10.88□□□□□ -0.67
YBX3-211ENST00000541351 PBX3P40426 434 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 CCR3P51677 355 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 CLCN4P51793 760 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 BCAR1P56945 870 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 LRRC55Q6ZSA7 311 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 FCHSD1Q86WN1 690 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 DGKHQ86XP1 1220 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 HDAC7Q8WUI4 952 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 SMG7Q92540 1137 aaKnown RBP10.88□□□□□ -0.67
YBX3-211ENST00000541351 MYADMQ96S97 322 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 KAT14Q9H8E8 782 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 RXFP3Q9NSD7 469 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 TNNQ9UQP3 1299 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 NUMBLQ9Y6R0 609 aa10.88□□□□□ -0.67
YBX3-211ENST00000541351 GDF9O60383 454 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 N4BP1O75113 896 aaKnown RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 SLC26A2P50443 739 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 ADCY1Q08828 1119 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 GET4Q7L5D6 327 aaPredicted RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 IQCA1Q86XH1 822 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 IGSF21Q96ID5 467 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 LSM14BQ9BX40 385 aaKnown RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 RNF41Q9H4P4 317 aaPredicted RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 VAT1LQ9HCJ6 419 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 MAN1C1Q9NR34 630 aa10.87□□□□□ -0.67
YBX3-211ENST00000541351 MRPL17Q9NRX2 175 aaKnown RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 GCN1Q92616 2671 aaKnown RBP10.87□□□□□ -0.67
YBX3-211ENST00000541351 TM4SF5O14894 197 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 INPPL1O15357 1258 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 ZC3H11AO75152 810 aaKnown RBP eCLIP10.86□□□□□ -0.67
YBX3-211ENST00000541351 GLUD1P00367 558 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 C1RP00736 705 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 CRYBB1P53674 252 aaPredicted RBP10.86□□□□□ -0.67
YBX3-211ENST00000541351 GPC5P78333 572 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 PSAPL1Q6NUJ1 521 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 TSSK4Q6SA08 328 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 RNF169Q8NCN4 708 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 AUTS2Q8WXX7 1259 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 ESR2Q92731 530 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 GPRASP2Q96D09 838 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 LRRCC1Q9C099 1032 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 CHMP4BQ9H444 224 aaKnown RBP10.86□□□□□ -0.67
YBX3-211ENST00000541351 PLEKHA4Q9H4M7 779 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 JMJD4Q9H9V9 463 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 DACT1Q9NYF0 836 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 RTEL1Q9NZ71 1219 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 PATJQ8NI35 1801 aa10.86□□□□□ -0.67
YBX3-211ENST00000541351 IGF2RP11717 2491 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 NT5C1B-RDH14C9J2C7 533 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 MAN2B1O00754 1011 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 ZBTB5O15062 677 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 MAFGO15525 162 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 URODP06132 367 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 ZNF806P0C7X5 589 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 NOVA1P51513 510 aaKnown RBP10.85□□□□□ -0.67
YBX3-211ENST00000541351 FOXC1Q12948 553 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 MTAPQ13126 283 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 STPG1Q5TH74 334 aa10.85□□□□□ -0.67
YBX3-211ENST00000541351 PCNX4Q63HM2 1172 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms