RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 MYH11P35749 1972 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 F5H6K3 240 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 PIK3CDO00329 1044 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CALUO43852 315 aaPredicted RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 PPP1R37O75864 691 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 NMT1P30419 496 aaKnown RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 ALDH1B1P30837 517 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 MDH1P40925 334 aaKnown RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 ZNF131P52739 623 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 KLRC3Q07444 240 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CUL1Q13616 776 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 BYSLQ13895 437 aaKnown RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 B3GNT9Q6UX72 402 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 TEKT1Q969V4 418 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 ZHX3Q9H4I2 956 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 KIAA1217Q5T5P2 1943 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 SRRM3A6NNA2 597 aaPredicted RBP10.4□□□□□ -0.75
CNOT4-212ENST00000541284 PGRMC1O00264 195 aaKnown RBP10.4□□□□□ -0.75
CNOT4-212ENST00000541284 CEP104O60308 925 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 EVI5O60447 810 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 PSMD10O75832 226 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 SLITRK3O94933 977 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 SEC24CP53992 1094 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 GALCP54803 685 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 ZC2HC1CQ53FD0 456 aaPredicted RBP10.4□□□□□ -0.75
CNOT4-212ENST00000541284 DCAF17Q5H9S7 520 aaPredicted RBP10.4□□□□□ -0.75
CNOT4-212ENST00000541284 TMC3Q7Z5M5 1100 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 KSR1Q8IVT5 923 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 MYCBPAPQ8TBZ2 947 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 ARHGEF26Q96DR7 871 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 AMNQ9BXJ7 453 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 PPP1R9AQ9ULJ8 1098 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 COG5Q9UP83 839 aa10.4□□□□□ -0.75
CNOT4-212ENST00000541284 SFI1A8K8P3 1242 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 DCDC2CA8MYV0 355 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 HMGB1P1B2RPK0 211 aaPredicted RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 EBAG9O00559 213 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 EIF3DO15371 548 aaKnown RBP eCLIP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 MARCH6O60337 910 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 BUB1BO60566 1050 aaPredicted RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 HLA-DOAP06340 250 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 MMP10P09238 476 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 HOXA13P31271 388 aaPredicted RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 OTOP1Q7RTM1 612 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 ZNF473Q8WTR7 871 aaKnown RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 TAS2R14Q9NYV8 317 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 SSC5DA1L4H1 1573 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 GFPT2O94808 682 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 LIG3P49916 1009 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 MCCD1P59942 119 aaPredicted RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 CERKLQ49MI3 558 aaPredicted RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 SPAG5Q96R06 1193 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 CELF4Q9BZC1 486 aaKnown RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 METTL14Q9HCE5 456 aaKnown RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 ERVK-5Q9HDB9 667 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 AMACRQ9UHK6 382 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 TTI1O43156 1089 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 DAPK3O43293 454 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
CNOT4-212ENST00000541284 MAPK7Q13164 816 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 USH1GQ495M9 461 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 SYDE2Q5VT97 1194 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 ZDHHC14Q8IZN3 488 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 BANK1Q8NDB2 785 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
CNOT4-212ENST00000541284 A6NNZ2 444 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 FLOT1O75955 427 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 GCNT3O95395 438 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 H2AFZP0C0S5 128 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 SOX5P35711 763 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 TCP10Q12799 353 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 PLS1Q14651 629 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 SPRED3Q2MJR0 410 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 TUBB8Q3ZCM7 444 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 CEP85LQ5SZL2 805 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 CHADLQ6NUI6 762 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 H2AFVQ71UI9 128 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 FBXO11Q86XK2 927 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 CNPY4Q8N129 248 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 DAW1Q8N136 415 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 PIGOQ8TEQ8 1089 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 RUFY1Q96T51 708 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 SLITRK6Q9H5Y7 841 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 RABGAP1Q9Y3P9 1069 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 CCDC188H7C350 402 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 GDF11O95390 407 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 PAEPP09466 180 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 EPS15P42566 896 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 FMO5P49326 533 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 ICA1Q05084 483 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 CTTNQ14247 550 aaKnown RBP10.38□□□□□ -0.75
CNOT4-212ENST00000541284 UBAP2Q5T6F2 1119 aaKnown RBP10.38□□□□□ -0.75
CNOT4-212ENST00000541284 YTHDF3Q7Z739 585 aaKnown RBP10.38□□□□□ -0.75
CNOT4-212ENST00000541284 GLYCTKQ8IVS8 523 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 SUGP1Q8IWZ8 645 aaKnown RBP10.38□□□□□ -0.75
CNOT4-212ENST00000541284 ERMNQ8TAM6 284 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 U2AF1L4Q8WU68 220 aaKnown RBP10.38□□□□□ -0.75
CNOT4-212ENST00000541284 SLC5A5Q92911 643 aa10.38□□□□□ -0.75
CNOT4-212ENST00000541284 CCT8L2Q96SF2 557 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms