RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TET1Q8NFU7 2136 aa10.3□□□□□ -0.76
SNHG1-215ENST00000540904 KAT6AQ92794 2004 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 LAMA2P24043 3122 aaKnown RBP10.29□□□□□ -0.76
SNHG1-215ENST00000540904 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 PP2D1A8MPX8 630 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 ENPP3O14638 875 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 GPR182O15218 404 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 STX6O43752 255 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 CSDE1O75534 798 aaKnown RBP10.29□□□□□ -0.76
SNHG1-215ENST00000540904 GJB5O95377 273 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 DARSP14868 501 aaKnown RBP10.29□□□□□ -0.76
SNHG1-215ENST00000540904 EIF4BP23588 611 aaKnown RBP10.29□□□□□ -0.76
SNHG1-215ENST00000540904 CDC25AP30304 524 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 RARRES1P49788 294 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 RESTQ13127 1097 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 EMC2Q15006 297 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 ODR4Q5SWX8 454 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 FAM228AQ86W67 206 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 KSR1Q8IVT5 923 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 SNX29Q8TEQ0 813 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 PSPC1Q8WXF1 523 aaKnown RBP10.29□□□□□ -0.76
SNHG1-215ENST00000540904 TOP1MTQ969P6 601 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 NACC1Q96RE7 527 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 RAD9AQ99638 391 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 MTRQ99707 1265 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 FTHL17Q9BXU8 183 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 TMX1Q9H3N1 280 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 ERVK-5Q9HDB9 667 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 ST3GAL5Q9UNP4 418 aa10.29□□□□□ -0.76
SNHG1-215ENST00000540904 MYH9P35579 1960 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 A0A087WZ62 844 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 DENND3A2RUS2 1198 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 LCHNA4D1U4 455 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 GAS2O43903 313 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 USO1O60763 962 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 DGAT1O75907 488 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 SLC34A2O95436 690 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 BMP15O95972 392 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 SRGAP2CP0DJJ0 459 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 XRCC6P12956 609 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 FGFR4P22455 802 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 CDC42EP1Q00587 391 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 GRIN2CQ14957 1233 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 SF3A1Q15459 793 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 ZRSR1Q15695 479 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 ECM1Q16610 540 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 FOXD4L5Q5VV16 416 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 KRT79Q5XKE5 535 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 ARL6IP4Q66PJ3 421 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 FAM173BQ6P4H8 233 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 MAEAQ7L5Y9 396 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 RTN4RL1Q86UN2 441 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 TCP11Q8WWU5 503 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 PRPF31Q8WWY3 499 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 LINC01599Q8WXQ3 324 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 FOXD4L4Q8WXT5 416 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 ADAM2Q99965 735 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 FDXACB1Q9BRP7 624 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 GCOM2Q9BZD3 368 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 TSPYL2Q9H2G4 693 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 ATP6V0A4Q9HBG4 840 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 DDX19AQ9NUU7 478 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 DBR1Q9UK59 544 aaKnown RBP10.28□□□□□ -0.76
SNHG1-215ENST00000540904 KIAA1024Q9UPX6 916 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 INSL6Q9Y581 213 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 COL4A3BPQ9Y5P4 624 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 STK24Q9Y6E0 443 aa10.28□□□□□ -0.76
SNHG1-215ENST00000540904 SZT2Q5T011 3432 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 ARHGEF35A5YM69 484 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 MGEA5O60502 916 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 MUTP22033 750 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 TAP1Q03518 808 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 CEBPZQ03701 1054 aaKnown RBP10.27□□□□□ -0.77
SNHG1-215ENST00000540904 LAMTOR4Q0VGL1 99 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 ZNF410Q86VK4 478 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 RNF149Q8NC42 400 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 GUCD1Q96NT3 240 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 CDX2Q99626 313 aaPredicted RBP10.27□□□□□ -0.77
SNHG1-215ENST00000540904 ZSCAN16Q9H4T2 348 aaPredicted RBP10.27□□□□□ -0.77
SNHG1-215ENST00000540904 CERS4Q9HA82 394 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 XPNPEP1Q9NQW7 623 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 CLIC4Q9Y696 253 aa10.27□□□□□ -0.77
SNHG1-215ENST00000540904 ASAP2O43150 1006 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 SFPQP23246 707 aaKnown RBP eCLIP10.26□□□□□ -0.77
SNHG1-215ENST00000540904 MXD4Q14582 209 aaPredicted RBP10.26□□□□□ -0.77
SNHG1-215ENST00000540904 PADI6Q6TGC4 694 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 SPRED2Q7Z698 418 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 NPAS4Q8IUM7 802 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 MYLIPQ8WY64 445 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 ARNTL2Q8WYA1 636 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 PLIN2Q99541 437 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 MMTAG2Q9BU76 263 aaKnown RBP10.26□□□□□ -0.77
SNHG1-215ENST00000540904 INO80BQ9C086 356 aaPredicted RBP10.26□□□□□ -0.77
SNHG1-215ENST00000540904 POLR3FQ9H1D9 316 aaPredicted RBP10.26□□□□□ -0.77
SNHG1-215ENST00000540904 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 PRDM12Q9H4Q4 367 aa10.26□□□□□ -0.77
SNHG1-215ENST00000540904 IFT122Q9HBG6 1241 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms