RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 SEC24CP53992 1094 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 AMPD2Q01433 879 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 MTM1Q13496 603 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 MEA1Q16626 185 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 RPUSD2Q8IZ73 545 aaKnown RBP10.71□□□□□ -0.69
PHC1-208ENST00000540574 GLG1Q92896 1179 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 IFT74Q96LB3 600 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 ZDHHC15Q96MV8 337 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 TBK1Q9UHD2 729 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 LCMT1Q9UIC8 334 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 DAAM1Q9Y4D1 1078 aa10.71□□□□□ -0.69
PHC1-208ENST00000540574 SLIT2O94813 1529 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 MYH3P11055 1940 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 CYP26A1O43174 497 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 CD19P15391 556 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 GAP43P17677 238 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 LIG4P49917 911 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 DMP1Q13316 513 aaPredicted RBP10.71□□□□□ -0.7
PHC1-208ENST00000540574 ARSHQ5FYA8 562 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 SLC35G2Q8TBE7 412 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 CABS1Q96KC9 395 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 CBWD1Q9BRT8 395 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 INTS2Q9H0H0 1204 aaKnown RBP10.71□□□□□ -0.7
PHC1-208ENST00000540574 ZNF70Q9UC06 446 aaPredicted RBP10.71□□□□□ -0.7
PHC1-208ENST00000540574 MTUS1Q9ULD2 1270 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 BZW2Q9Y6E2 419 aaKnown RBP10.71□□□□□ -0.7
PHC1-208ENST00000540574 CAPN7Q9Y6W3 813 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 NUP188Q5SRE5 1749 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 DUOX1Q9NRD9 1551 aa10.71□□□□□ -0.7
PHC1-208ENST00000540574 N4BP2Q86UW6 1770 aaPredicted RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 SSU72P8A0A1W2PR75 194 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 PDXKO00764 312 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 ATF7P17544 494 aaPredicted RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 CD58P19256 250 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 NR1D1P20393 614 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 FMO5P49326 533 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 PPP4R3CPQ6ZMV5 832 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 CEP57Q86XR8 500 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 TSEN2Q8NCE0 465 aaKnown RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 SUPT20HQ8NEM7 779 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 UNC45AQ9H3U1 944 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 MTRF1LQ9UGC7 380 aaKnown RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 NID2Q14112 1375 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 A0A1W2PQJ5 194 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 RASSF10A6NK89 507 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 GOLGA8KD6RF30 607 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 ASNSP08243 561 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 CRY2Q49AN0 593 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 TMEM119Q4V9L6 283 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 CCDC38Q502W7 563 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 SEZ6Q53EL9 994 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 DEFB132Q7Z7B7 95 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 ANKRD35Q8N283 1001 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 RNF10Q8N5U6 811 aaKnown RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 METTL13Q8N6R0 699 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 BAP1Q92560 729 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 FAM213AQ9BRX8 229 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 PODXL2Q9NZ53 605 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 DENND3A2RUS2 1198 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 FOXN3O00409 490 aaPredicted RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 TLR2O60603 784 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 LMNB1P20700 586 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 SMARCA1P28370 1054 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 IRX5P78411 483 aaPredicted RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 GABPAQ06546 454 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 MTMR2Q13614 643 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
PHC1-208ENST00000540574 CCDC121Q6ZUS5 278 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 HAUS6Q7Z4H7 955 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 ZBTB33Q86T24 672 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 GPATCH11Q8N954 259 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 HAUS1Q96CS2 278 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 IMPG2Q9BZV3 1241 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 KCNH7Q9NS40 1196 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 FBXL5Q9UKA1 691 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 RAB21Q9UL25 225 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 UTRNP46939 3433 aa10.7□□□□□ -0.7
PHC1-208ENST00000540574 ITGB4P16144 1822 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 ACSL3O95573 720 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 STRN3Q13033 797 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 NAB2Q15742 525 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 DACT2Q5SW24 774 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 SWSAP1Q6NVH7 229 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 EMBQ6PCB8 327 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 RNF207Q6ZRF8 634 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 FRMD5Q7Z6J6 570 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 FLAD1Q8NFF5 587 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 HNRNPLLQ8WVV9 542 aaKnown RBP10.69□□□□□ -0.7
PHC1-208ENST00000540574 THAP2Q9H0W7 228 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 GABBR1Q9UBS5 961 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 CICQ96RK0 1608 aaPredicted RBP10.69□□□□□ -0.7
PHC1-208ENST00000540574 GRID2IPA4D2P6 1211 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 CETN2P41208 172 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 PDE6CP51160 858 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 VAMP7P51809 220 aa10.69□□□□□ -0.7
PHC1-208ENST00000540574 POLGP54098 1239 aaPredicted RBP10.69□□□□□ -0.7
PHC1-208ENST00000540574 IGBP1P78318 339 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms