RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TCF25Q9BQ70 676 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 RIOX1Q9H6W3 641 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 MLXIPQ9HAP2 919 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 KCNK12Q9HB15 430 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 ENTPD7Q9NQZ7 604 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 RABGEF1Q9UJ41 708 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 LRFN2Q9ULH4 789 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 SIT1Q9Y3P8 196 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 HCFC2Q9Y5Z7 792 aa10.15□□□□□ -0.78
TRAPPC1-202ENST00000540486 ASPMQ8IZT6 3477 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 HIDE1A8MVS5 230 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 BHMG1C9JSJ3 638 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 SLC30A4O14863 429 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 SCG2P13521 617 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 RXRAP19793 462 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 ARHGAP4P98171 946 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 NONOQ15233 471 aaKnown RBP eCLIP10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 PROX2Q3B8N5 592 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 RAB11FIP4Q86YS3 637 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 FBXL16Q8N461 479 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 NETO1Q8TDF5 533 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 LINC01599Q8WXQ3 324 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 TBC1D5Q92609 795 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 AGXT2Q9BYV1 514 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 DLGAP2Q9P1A6 1054 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 COL20A1Q9P218 1284 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 PCDHB7Q9Y5E2 793 aa10.14□□□□□ -0.79
TRAPPC1-202ENST00000540486 FANCMQ8IYD8 2048 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 KRBA1A5PL33 1030 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 PPP1R11O60927 126 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 DDAH1O94760 285 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 PROS1P07225 676 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 TGM1P22735 817 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 RPS6KB1P23443 525 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 PSMA5P28066 241 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 SHC2P98077 582 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 KRT17Q04695 432 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 CDC37Q16543 378 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 QRICH1Q2TAL8 776 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 USH1GQ495M9 461 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 BLOC1S2Q6QNY1 142 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 NFXL1Q6ZNB6 911 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 Q6ZUG5 572 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 RUFY3Q7L099 469 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 TMC7Q7Z402 723 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 CMTR1Q8N1G2 835 aaKnown RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 SRBD1Q8N5C6 995 aaKnown RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 FANCBQ8NB91 859 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 COLGALT1Q8NBJ5 622 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 LMBR1Q8WVP7 490 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 ATRIPQ8WXE1 791 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 DDX1Q92499 740 aaKnown RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 TM6SF1Q9BZW5 370 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 AGO3Q9H9G7 860 aaKnown RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 TBC1D17Q9HA65 648 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 PXMP2Q9NR77 195 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 DZANK1Q9NVP4 752 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 FBXO4Q9UKT5 387 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 ZNF215Q9UL58 517 aaPredicted RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 USP18Q9UMW8 372 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 PCDHGA2Q9Y5H1 932 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 SLC12A7Q9Y666 1083 aa10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
TRAPPC1-202ENST00000540486 ZFYVE26Q68DK2 2539 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 ABCB11O95342 1321 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 NOP56O00567 594 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 TBC1D4O60343 1298 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 PLEKHA8P1O95397 391 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 DCNP07585 359 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 WEE2P0C1S8 567 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 LAG3P18627 525 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 EIF2AK2P19525 551 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 UBA1P22314 1058 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 SMARCA1P28370 1054 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 CD52P31358 61 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 SARSP49591 514 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 GATMP50440 423 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 SP2Q02086 613 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 APOBRQ0VD83 1088 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 TOB2Q14106 344 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 BMS1Q14692 1282 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 SPECC1Q5M775 1068 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 RARS2Q5T160 578 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 APOA5Q6Q788 366 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 MRPL43Q8N983 215 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 PIGSQ96S52 555 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 TYW1Q9NV66 732 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 BAZ2BQ9UIF8 2168 aaKnown RBP10.12□□□□□ -0.79
TRAPPC1-202ENST00000540486 KIAA1217Q5T5P2 1943 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 PLXNA4Q9HCM2 1894 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 KLF18A0A0U1RQI7 1052 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 TBKBP1A7MCY6 615 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 ZBTB5O15062 677 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 DHX16O60231 1041 aaKnown RBP10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 SORBS3O60504 671 aa10.11□□□□□ -0.79
TRAPPC1-202ENST00000540486 CLASP2O75122 1294 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms