RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 LETM2Q2VYF4 491 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 EARS2Q5JPH6 523 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 ANO5Q75V66 913 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 KLHL23Q8NBE8 558 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 ALG13Q9NP73 1137 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 RNF19AQ9NV58 838 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 ORC3Q9UBD5 711 aaPredicted RBP14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 PPME1Q9Y570 386 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 TRIOO75962 3097 aa14.74□□□□□ -0.05
SEMA4D-223ENST00000540475 LARGE1O95461 756 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 QARSP47897 775 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 SPIRE1Q08AE8 756 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 DRP2Q13474 957 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 PAN2Q504Q3 1202 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 PTCRAQ6ISU1 281 aaPredicted RBP14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 ZNF598Q86UK7 904 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 NSUN7Q8NE18 718 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 PPP1R16BQ96T49 567 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 CWH43Q9H720 699 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 ATP6V0A4Q9HBG4 840 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 CD320Q9NPF0 282 aa14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 SEPT9Q9UHD8 586 aaPredicted RBP14.73□□□□□ -0.05
SEMA4D-223ENST00000540475 A0A0U1RQF3 1178 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 TMEM150BA6NC51 233 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 DKC1O60832 514 aaKnown RBP eCLIP14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 SEC24BO95487 1268 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 EOMESO95936 686 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 P4HBP07237 508 aaKnown RBP14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 ZSCAN20P17040 1043 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 ADAM15Q13444 863 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 EPHA7Q15375 998 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 CSPP1Q1MSJ5 1256 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 MTERF2Q49AM1 385 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 PIK3AP1Q6ZUJ8 805 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 ZNF410Q86VK4 478 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 C4orf19Q8IY42 314 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 NECAB1Q8N987 351 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 POF1BQ8WVV4 589 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 CASD1Q96PB1 797 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 JPH2Q9BR39 696 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 TMEM117Q9H0C3 514 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 CHST12Q9NRB3 414 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 AAASQ9NRG9 546 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 TYW1Q9NV66 732 aaKnown RBP14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 PCDHB12Q9Y5F1 795 aa14.72□□□□□ -0.05
SEMA4D-223ENST00000540475 TBKBP1A7MCY6 615 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 HOXA2O43364 376 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 CCNT1O60563 726 aaKnown RBP14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 IL9P15248 144 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 KRT2P35908 639 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 DNM2P50570 870 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 NEK4P51957 841 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 PLCB3Q01970 1234 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 DLX2Q07687 328 aaPredicted RBP14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 NR5A1Q13285 461 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 LRRC55Q6ZSA7 311 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 ECHDC2Q86YB7 292 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 EXOC8Q8IYI6 725 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 SLFN12Q8IYM2 578 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 RSPH1Q8WYR4 309 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 C1QTNF1Q9BXJ1 281 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 GCOM2Q9BZD3 368 aaPredicted RBP14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 DHX33Q9H6R0 707 aaKnown RBP14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 CYP26B1Q9NR63 512 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 CLDND1Q9NY35 253 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 WRAP73Q9P2S5 460 aaPredicted RBP14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 PRKAG3Q9UGI9 489 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 LZTS1Q9Y250 596 aa14.71□□□□□ -0.05
SEMA4D-223ENST00000540475 C19orf67A6NJJ6 358 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 DDX11L8A8MPP1 907 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 PI4K2BG5E9Z4 385 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 H3BQ06 376 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 DTNBO60941 627 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 FGFR1P11362 822 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 ATF7P17544 494 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 IRS1P35568 1242 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 ST3GAL1Q11201 340 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 PDE12Q6L8Q7 609 aaKnown RBP14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 POTEDQ86YR6 584 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 EFHBQ8N7U6 833 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 COLGALT1Q8NBJ5 622 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 NLRP7Q8WX94 980 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 MSLNLQ96KJ4 702 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 INO80BQ9C086 356 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 EPHX3Q9H6B9 360 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 IFT122Q9HBG6 1241 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 DACT1Q9NYF0 836 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 SUCLA2Q9P2R7 463 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 FAM50BQ9Y247 325 aa14.7□□□□□ -0.06
SEMA4D-223ENST00000540475 A0A087WZ62 844 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 FSCN2O14926 492 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 ZNF623O75123 536 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 TBX10O75333 385 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 FGF18O76093 207 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 SLITRK3O94933 977 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 EYA4O95677 639 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 LAG3P18627 525 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms