RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TOP1MTQ969P6 601 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 MTMR9Q96QG7 549 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 TEKT3Q9BXF9 490 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 FOXP1Q9H334 677 aaPredicted RBP12.85□□□□□ -0.35
TMEM258-205ENST00000540434 ZNF302Q9NR11 478 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 DISC1Q9NRI5 854 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 ERAP1Q9NZ08 941 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 PCDHA10Q9Y5I2 948 aa12.85□□□□□ -0.35
TMEM258-205ENST00000540434 EVPLQ92817 2033 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 A0A087WWV3 80 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 BACH1O14867 736 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 ZBTB39O15060 712 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 KRT76Q01546 638 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 PPFIA1Q13136 1202 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 MIS18BP1Q6P0N0 1132 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 PDXDC2PQ6P474 469 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 SH2D3AQ9BRG2 576 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
TMEM258-205ENST00000540434 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
TMEM258-205ENST00000540434 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.83□□□□□ -0.36
TMEM258-205ENST00000540434 MBLAC1A4D2B0 266 aaPredicted RBP12.83□□□□□ -0.36
TMEM258-205ENST00000540434 C5orf67F2Z3F1 127 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 MCM7P33993 719 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 THPOP40225 353 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 ADAM15Q13444 863 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 CBX2Q14781 532 aaPredicted RBP12.83□□□□□ -0.36
TMEM258-205ENST00000540434 IL17AQ16552 155 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 DGLUCYQ7Z3D6 616 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 MIER3Q7Z3K6 550 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 TMEM105Q8N8V8 129 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 ZNF579Q8NAF0 562 aaKnown RBP12.83□□□□□ -0.36
TMEM258-205ENST00000540434 ATP8B4Q8TF62 1192 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 NKD2Q969F2 451 aaPredicted RBP12.83□□□□□ -0.36
TMEM258-205ENST00000540434 SNX21Q969T3 373 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 CEP89Q96ST8 783 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 AZI2Q9H6S1 392 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 RGL1Q9NZL6 768 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 CLEC1BQ9P126 229 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 SAMM50Q9Y512 469 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 PCDHB6Q9Y5E3 794 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 NRCAMQ92823 1304 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 IGSF9BQ9UPX0 1349 aa12.83□□□□□ -0.36
TMEM258-205ENST00000540434 MYO10Q9HD67 2058 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 LOXHD1Q8IVV2 1947 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 WDR64B1ANS9 1081 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 K7ELQ4 463 aaPredicted RBP12.82□□□□□ -0.36
TMEM258-205ENST00000540434 CHRNA1P02708 482 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 PSAPP07602 524 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 CTSHP09668 335 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 GCFC2P16383 781 aaKnown RBP12.82□□□□□ -0.36
TMEM258-205ENST00000540434 CTNNB1P35222 781 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 TXKP42681 527 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 NDUFV1P49821 464 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 PPP2R5CQ13362 524 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 SAFBQ15424 915 aaKnown RBP eCLIP12.82□□□□□ -0.36
TMEM258-205ENST00000540434 LARP1BQ659C4 914 aaKnown RBP12.82□□□□□ -0.36
TMEM258-205ENST00000540434 ADGRD2Q7Z7M1 963 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 SMAP1Q8IYB5 467 aaPredicted RBP12.82□□□□□ -0.36
TMEM258-205ENST00000540434 DNAJB3Q8WWF6 145 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 RIPOR3Q96MK2 946 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 FAM20AQ96MK3 541 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 CDHR5Q9HBB8 845 aa12.82□□□□□ -0.36
TMEM258-205ENST00000540434 RALYQ9UKM9 306 aaKnown RBP12.82□□□□□ -0.36
TMEM258-205ENST00000540434 BAHCC1Q9P281 2608 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 RSPH10B2B2RC85 870 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 TBX3O15119 743 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 EYA4O95677 639 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 RSPH10BP0C881 870 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 KLRC1P26715 233 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 MGAT3Q09327 533 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 TMEM62Q0P6H9 643 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 CAMK1Q14012 370 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 CALCRLQ16602 461 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 TTC38Q5R3I4 469 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 FAM160B1Q5W0V3 765 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 FAM173BQ6P4H8 233 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 DYDC2Q96IM9 177 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 TUBE1Q9UJT0 475 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 USP15Q9Y4E8 981 aaPredicted RBP12.81□□□□□ -0.36
TMEM258-205ENST00000540434 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.81□□□□□ -0.36
TMEM258-205ENST00000540434 TPRP12270 2363 aaKnown RBP12.81□□□□□ -0.36
TMEM258-205ENST00000540434 CFAP47Q6ZTR5 3102 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 ZNF292O60281 2723 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 KIAA1671Q9BY89 1806 aa12.81□□□□□ -0.36
TMEM258-205ENST00000540434 TTC3P53804 2025 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 POTEMA6NI47 508 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 HBP1O60381 514 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 NEMFO60524 1076 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 SLITRK3O94933 977 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 C22orf31O95567 290 aa12.8□□□□□ -0.36
TMEM258-205ENST00000540434 RB1P06400 928 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms