RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 MGAT3Q09327 533 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 DRP2Q13474 957 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 BFSP2Q13515 415 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 GIT2Q14161 759 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 TRAF7Q6Q0C0 670 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 FAM43BQ6ZT52 329 aaPredicted RBP20.42■□□□□ 0.86
NEK2-205ENST00000540251 RSPH3Q86UC2 560 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 GPBP1Q86WP2 473 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 CEP57L1Q8IYX8 460 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 LRRC71Q8N4P6 559 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 CCDC155Q8N6L0 562 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 DNAJB3Q8WWF6 145 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 PSPC1Q8WXF1 523 aaKnown RBP20.42■□□□□ 0.86
NEK2-205ENST00000540251 ZBTB10Q96DT7 871 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 NTPCRQ9BSD7 190 aaKnown RBP20.42■□□□□ 0.86
NEK2-205ENST00000540251 NOC4LQ9BVI4 516 aaKnown RBP20.42■□□□□ 0.86
NEK2-205ENST00000540251 TRIM9Q9C026 710 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 SUGCTQ9HAC7 445 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 KCNG1Q9UIX4 513 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 SQORQ9Y6N5 450 aa20.42■□□□□ 0.86
NEK2-205ENST00000540251 LTBP2Q14767 1821 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 PARNO95453 639 aaKnown RBP20.41■□□□□ 0.86
NEK2-205ENST00000540251 CKBP12277 381 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 CLCN3P51790 818 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 IFNLR1Q8IU57 520 aaPredicted RBP20.41■□□□□ 0.86
NEK2-205ENST00000540251 METTL13Q8N6R0 699 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 DDX12PQ92771 950 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 PAGE5Q96GU1 130 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 DRC1Q96MC2 740 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 MAP7D2Q96T17 732 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 NFKBIZQ9BYH8 718 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 ADAMTS10Q9H324 1103 aa20.41■□□□□ 0.86
NEK2-205ENST00000540251 BMP2KQ9NSY1 1161 aaPredicted RBP20.41■□□□□ 0.86
NEK2-205ENST00000540251 SUCLA2Q9P2R7 463 aaPredicted RBP20.41■□□□□ 0.86
NEK2-205ENST00000540251 GPR32O75388 356 aa20.4■□□□□ 0.86
NEK2-205ENST00000540251 SSBP05455 408 aaKnown RBP eCLIP20.4■□□□□ 0.86
NEK2-205ENST00000540251 ZNF410Q86VK4 478 aa20.4■□□□□ 0.86
NEK2-205ENST00000540251 CNNM3Q8NE01 707 aa20.4■□□□□ 0.86
NEK2-205ENST00000540251 PRPF31Q8WWY3 499 aaKnown RBP20.4■□□□□ 0.86
NEK2-205ENST00000540251 TMEM143Q96AN5 459 aa20.4■□□□□ 0.86
NEK2-205ENST00000540251 CCDC34Q96HJ3 373 aa20.4■□□□□ 0.86
NEK2-205ENST00000540251 REEP2Q9BRK0 252 aa20.4■□□□□ 0.86
NEK2-205ENST00000540251 HIP1RO75146 1068 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 PTMSP20962 102 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 SCP2P22307 547 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 GLRA2P23416 452 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 GPC3P51654 580 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 MRPS6P82932 125 aaKnown RBP20.39■□□□□ 0.85
NEK2-205ENST00000540251 TMEM39AQ9NV64 488 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 DACT1Q9NYF0 836 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 COL4A3BPQ9Y5P4 624 aa20.39■□□□□ 0.85
NEK2-205ENST00000540251 SCN5AQ14524 2016 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 PVALEFA0A1B0GWK0 134 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 TRIM43BA6NCK2 446 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 GTPBP6O43824 516 aaPredicted RBP20.38■□□□□ 0.85
NEK2-205ENST00000540251 TIMP1P01033 207 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 CHRNA1P02708 482 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 SELPP16109 830 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 NAMPTP43490 491 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 CRYBB1P53674 252 aaPredicted RBP20.38■□□□□ 0.85
NEK2-205ENST00000540251 EHHADHQ08426 723 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 LAMTOR4Q0VGL1 99 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 PPP2R5AQ15172 486 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 ZNF618Q5T7W0 954 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 TET1Q8NFU7 2136 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 SPATA20Q8TB22 786 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 SPIRE2Q8WWL2 714 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 TRIM43Q96BQ3 446 aaPredicted RBP20.38■□□□□ 0.85
NEK2-205ENST00000540251 CELF4Q9BZC1 486 aaKnown RBP20.38■□□□□ 0.85
NEK2-205ENST00000540251 POLR3FQ9H1D9 316 aaPredicted RBP20.38■□□□□ 0.85
NEK2-205ENST00000540251 HIPK3Q9H422 1215 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 GPRC5CQ9NQ84 441 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 SEL1LQ9UBV2 794 aa20.38■□□□□ 0.85
NEK2-205ENST00000540251 KINO60870 393 aaKnown RBP20.37■□□□□ 0.85
NEK2-205ENST00000540251 MBD3O95983 291 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 MAPTP10636 758 aaKnown RBP20.37■□□□□ 0.85
NEK2-205ENST00000540251 PLS3P13797 630 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 THPOP40225 353 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 DHX8Q14562 1220 aaKnown RBP20.37■□□□□ 0.85
NEK2-205ENST00000540251 FAM102BQ5T8I3 360 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 USP38Q8NB14 1042 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 GPT2Q8TD30 523 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 ASAP3Q8TDY4 903 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 FAM49AQ9H0Q0 323 aaPredicted RBP20.37■□□□□ 0.85
NEK2-205ENST00000540251 IFT122Q9HBG6 1241 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 LARSQ9P2J5 1176 aaKnown RBP20.37■□□□□ 0.85
NEK2-205ENST00000540251 AKT3Q9Y243 479 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 TRPV2Q9Y5S1 764 aa20.37■□□□□ 0.85
NEK2-205ENST00000540251 NPHP3-ACAD11A0A0J9YXS1 232 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 RSPH10B2B2RC85 870 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 EVI5O60447 810 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 VTNP04004 478 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 IQCF3P0C7M6 154 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 RSPH10BP0C881 870 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 GAP43P17677 238 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 NLRP11P59045 1033 aaKnown RBP20.36■□□□□ 0.85
NEK2-205ENST00000540251 PTENP60484 403 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 DPYDQ12882 1025 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 CAPSQ13938 189 aa20.36■□□□□ 0.85
NEK2-205ENST00000540251 PCBP1Q15365 356 aaKnown RBP eCLIP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms