RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PACS2Q86VP3 889 aa14.86□□□□□ -0.03
BNIP3-202ENST00000540159 NLGN1Q8N2Q7 840 aa14.86□□□□□ -0.03
BNIP3-202ENST00000540159 TSKSQ9UJT2 592 aa14.86□□□□□ -0.03
BNIP3-202ENST00000540159 UBR3Q6ZT12 1888 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 KLRG2A4D1S0 409 aaPredicted RBP14.85□□□□□ -0.03
BNIP3-202ENST00000540159 PGRMC1O00264 195 aaKnown RBP14.85□□□□□ -0.03
BNIP3-202ENST00000540159 FOXN3O00409 490 aaPredicted RBP14.85□□□□□ -0.03
BNIP3-202ENST00000540159 EBAG9O00559 213 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 EIF3HO15372 352 aaKnown RBP eCLIP14.85□□□□□ -0.03
BNIP3-202ENST00000540159 PDE6BP35913 854 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 PSMC2P35998 433 aaKnown RBP14.85□□□□□ -0.03
BNIP3-202ENST00000540159 MARCKSL1P49006 195 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 FMO5P49326 533 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 TATDN1Q6P1N9 297 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 HS2ST1Q7LGA3 356 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 ZNF572Q7Z3I7 529 aaPredicted RBP14.85□□□□□ -0.03
BNIP3-202ENST00000540159 VPS36Q86VN1 386 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 LRRC57Q8N9N7 239 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 IL31RAQ8NI17 732 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 FAM20AQ96MK3 541 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 FBXL5Q9UKA1 691 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 USP20Q9Y2K6 914 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 SHTN1A0MZ66 631 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 YDJCA8MPS7 323 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 F8VZ95 297 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 ATP2C2O75185 946 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 KRT13P13646 458 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 NR1D1P20393 614 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 HSD17B3P37058 310 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 SOX10P56693 466 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 STRIP1Q5VSL9 837 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 IQCKQ8N0W5 287 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 CCDC127Q96BQ5 260 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 HSD17B14Q9BPX1 270 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 WDR11Q9BZH6 1224 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 ATP8A1Q9Y2Q0 1164 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 FAM169AQ9Y6X4 670 aa14.85□□□□□ -0.03
BNIP3-202ENST00000540159 GCOM1H8Y6P7 765 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 HIP1RO75146 1068 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 POLR2MP0CAP2 368 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 ITIH3Q06033 890 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 PHLDB3Q6NSJ2 640 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 C1orf186Q6ZWK4 172 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 NAP1L4Q99733 375 aaKnown RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 SH3GL2Q99962 352 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 CBWD1Q9BRT8 395 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 TAF1DQ9H5J8 278 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 ERVK-5Q9HDB9 667 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 UBE2TQ9NPD8 197 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 FRMD4BQ9Y2L6 1034 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 TLDC2A0PJX2 215 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 ARHGEF35A5YM69 484 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 H0YIN7 160 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 NBPF9Q3BBW0 867 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 UBAP2Q5T6F2 1119 aaKnown RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 CAVIN3Q969G5 261 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 MBOAT7Q96N66 472 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 E7EVH7 732 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 PPP1R12BO60237 982 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 IBSPP21815 317 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 UAP1Q16222 522 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 C2CD6Q53TS8 623 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 NSMFQ6X4W1 530 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 CTNNBL1Q8WYA6 563 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 POP1Q99575 1024 aaKnown RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 PDGFDQ9GZP0 370 aaPredicted RBP14.84□□□□□ -0.03
BNIP3-202ENST00000540159 GLT8D2Q9H1C3 349 aa14.84□□□□□ -0.03
BNIP3-202ENST00000540159 LY75O60449 1722 aa14.83□□□□□ -0.03
BNIP3-202ENST00000540159 IPO5O00410 1097 aaKnown RBP14.83□□□□□ -0.04
BNIP3-202ENST00000540159 NFIBO00712 420 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 FOSP01100 380 aaPredicted RBP14.83□□□□□ -0.04
BNIP3-202ENST00000540159 TNFAIP3P21580 790 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 MYL7Q01449 175 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 CEP55Q53EZ4 464 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 FBXW10Q5XX13 1052 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 NT5DC3Q86UY8 548 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 IDI2Q9BXS1 227 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.04
BNIP3-202ENST00000540159 PLCB1Q9NQ66 1216 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 PTPN22Q9Y2R2 807 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 ZNF831Q5JPB2 1677 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 EMSYQ7Z589 1322 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 ECHS1P30084 290 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 SSTR3P32745 418 aaPredicted RBP14.83□□□□□ -0.04
BNIP3-202ENST00000540159 SOX5P35711 763 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 DHX9Q08211 1270 aaKnown RBP14.83□□□□□ -0.04
BNIP3-202ENST00000540159 RNF187Q5TA31 235 aaPredicted RBP14.83□□□□□ -0.04
BNIP3-202ENST00000540159 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 ALS2CLQ60I27 953 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 ZNF720Q7Z2F6 126 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 ARHGEF19Q8IW93 802 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.83□□□□□ -0.043e-7■■■■□ 20.8
BNIP3-202ENST00000540159 AMFRQ9UKV5 643 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 COG5Q9UP83 839 aa14.83□□□□□ -0.04
BNIP3-202ENST00000540159 GOLGA6L10A6NI86 522 aa14.82□□□□□ -0.04
BNIP3-202ENST00000540159 PSMD10O75832 226 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms