RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MSH4O15457 936 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 NCK2O43639 380 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 STAMBPO95630 424 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 NR1D1P20393 614 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 COASYQ13057 564 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 MCF2L2Q86YR7 1114 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 TC2NQ8N9U0 490 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 MCUR1Q96AQ8 359 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 TRIM10Q9UDY6 481 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 NPHP3-ACAD11A0A0J9YXS1 232 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 TBX3O15119 743 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 ATP1A1P05023 1023 aaKnown RBP10.82□□□□□ -0.68
TRAF1-202ENST00000540010 ADCY8P40145 1251 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 USP14P54578 494 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 PSMD2Q13200 908 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 NEDD9Q14511 834 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 NFRKBQ6P4R8 1299 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 LPAR1Q92633 364 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 KCNMB3Q9NPA1 279 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 RGPD3A6NKT7 1758 aaPredicted RBP10.82□□□□□ -0.68
TRAF1-202ENST00000540010 RGPD4Q7Z3J3 1758 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 COL2A1P02458 1487 aaPredicted RBP10.82□□□□□ -0.68
TRAF1-202ENST00000540010 MED24O75448 989 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 GFPT2O94808 682 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
TRAF1-202ENST00000540010 TMEM119Q4V9L6 283 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 RAD9BQ6WBX8 426 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 FAM169AQ9Y6X4 670 aa10.82□□□□□ -0.68
TRAF1-202ENST00000540010 FOCADQ5VW36 1801 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 LGALS16A8MUM7 142 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CTTNQ14247 550 aaKnown RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 TTI2Q6NXR4 508 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 NLGN2Q8NFZ4 835 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 BHMT2Q9H2M3 363 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 RANBP17Q9H2T7 1088 aaKnown RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 RPAP3Q9H6T3 665 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 TXNDC16Q9P2K2 825 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 PACSIN2Q9UNF0 486 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 RABGAP1Q9Y3P9 1069 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 DAAM1Q9Y4D1 1078 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 ZHX2Q9Y6X8 837 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CYP3A7-CYP3A51PA0A087WV96 503 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 ZNF185O15231 689 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CD19P15391 556 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 TNNI1P19237 187 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CYP3A7P24462 503 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CYP2C19P33261 490 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 MMP14P50281 582 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 ECM1Q16610 540 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 Q4G0T1 1027 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 APOBEC3FQ8IUX4 373 aaKnown RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 ZKSCAN4Q969J2 545 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 RGL1Q9NZL6 768 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 TFR2Q9UP52 801 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 ZNF280AP59817 542 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 GFPT1Q06210 699 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 DGKZQ13574 1117 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CEP55Q53EZ4 464 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 HIBCHQ6NVY1 386 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 SLC30A10Q6XR72 485 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 CATSPER3Q86XQ3 398 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 VPS52Q8N1B4 723 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 GUF1Q8N442 669 aaKnown RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 KIAA0895Q8NCT3 520 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 MYCBPQ99417 103 aaPredicted RBP10.81□□□□□ -0.68
TRAF1-202ENST00000540010 PLCB1Q9NQ66 1216 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 EMILIN3Q9NT22 766 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 GGA3Q9NZ52 723 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 TMOD4Q9NZQ9 345 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 KLHL14Q9P2G3 628 aa10.81□□□□□ -0.68
TRAF1-202ENST00000540010 EDIL3O43854 480 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 DLATP10515 647 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 ODR4Q5SWX8 454 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 ALKBH5Q6P6C2 394 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 PIGOQ8TEQ8 1089 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 EIF2AK1Q9BQI3 630 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 TEKT3Q9BXF9 490 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 FZD1Q9UP38 647 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 PGRMC1O00264 195 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 MAGEA9P43362 315 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 SESN3P58005 492 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 TBX2Q13207 712 aaPredicted RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 LRRC53A6NM62 1247 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 THAP12O43422 761 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 ICAM1P05362 532 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 EIF2AK2P19525 551 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 SNX1Q13596 522 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 ANKRD20A3Q5VUR7 823 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 FYB2Q5VWT5 728 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 CROCCP2Q86T23 111 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 TADA2BQ86TJ2 420 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 P2RX7Q99572 595 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 MAK16Q9BXY0 300 aaKnown RBP10.8□□□□□ -0.68
TRAF1-202ENST00000540010 TBK1Q9UHD2 729 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 PIK3CDO00329 1044 aa10.8□□□□□ -0.68
TRAF1-202ENST00000540010 PALMO75781 387 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms