RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 AFPP02771 609 aaKnown RBP24.62■■□□□ 1.53
HOMER3-204ENST00000539827 XRCC5P13010 732 aaKnown RBP24.62■■□□□ 1.53
HOMER3-204ENST00000539827 NCKAP1LP55160 1127 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 APBA1Q02410 837 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 MEA1Q16626 185 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 BSNDQ8WZ55 320 aa24.62■■□□□ 1.53
HOMER3-204ENST00000539827 MAFBQ9Y5Q3 323 aaPredicted RBP24.62■■□□□ 1.53
HOMER3-204ENST00000539827 TISP43B9A030 160 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 GTF2BQ00403 316 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 SPRYD7Q5W111 196 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 GPIHBP1Q8IV16 184 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 FBXO16Q8IX29 292 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-204ENST00000539827 MYRIPQ8NFW9 859 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 KIF18AQ8NI77 898 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 BORCS6Q96GS4 357 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 PCYT2Q99447 389 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 KIFC3Q9BVG8 833 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 TMEM206Q9H813 350 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 NMRK2Q9NPI5 230 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 XPNPEP1Q9NQW7 623 aa24.61■■□□□ 1.53
HOMER3-204ENST00000539827 EPN1Q9Y6I3 576 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-204ENST00000539827 NOL4O94818 638 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 TGFB3P10600 412 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 PPP2R3AQ06190 1150 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 RRAGAQ7L523 313 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 ANKRD23Q86SG2 305 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 GOLGA5Q8TBA6 731 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 PCIF1Q9H4Z3 704 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 MLXIPQ9HAP2 919 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 NLRC4Q9NPP4 1024 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 PDLIM7Q9NR12 457 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 DDX41Q9UJV9 622 aaKnown RBP24.6■■□□□ 1.53
HOMER3-204ENST00000539827 SLC45A1Q9Y2W3 748 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 DGAT1O75907 488 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 OATP04181 439 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 NPTX2P47972 431 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 ETF1P62495 437 aaKnown RBP24.6■■□□□ 1.53
HOMER3-204ENST00000539827 CACNA2D4Q7Z3S7 1137 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 BAP1Q92560 729 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 KIFAP3Q92845 792 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 ST6GALNAC4Q9H4F1 302 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 ATP6V0A4Q9HBG4 840 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 LZTFL1Q9NQ48 299 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 DNAI1Q9UI46 699 aa24.6■■□□□ 1.53
HOMER3-204ENST00000539827 IGKV6D-21A0A0A0MT36 114 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 LRRC53A6NM62 1247 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 NDUFA10O95299 355 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 CCNA1P78396 465 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 PDXDC1Q6P996 788 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 SLC35C1Q96A29 364 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 KMT5AQ9NQR1 393 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 FRMD4BQ9Y2L6 1034 aa24.59■■□□□ 1.53
HOMER3-204ENST00000539827 EXOC3O60645 756 aa24.58■■□□□ 1.53
HOMER3-204ENST00000539827 SMTNP53814 917 aa24.58■■□□□ 1.53
HOMER3-204ENST00000539827 DMP1Q13316 513 aaPredicted RBP24.58■■□□□ 1.53
HOMER3-204ENST00000539827 RDH13Q8NBN7 331 aa24.58■■□□□ 1.53
HOMER3-204ENST00000539827 MCPH1Q8NEM0 835 aa24.58■■□□□ 1.53
HOMER3-204ENST00000539827 MKNK1Q9BUB5 465 aa24.58■■□□□ 1.53
HOMER3-204ENST00000539827 MCM3APO60318 1980 aa24.58■■□□□ 1.53
HOMER3-204ENST00000539827 TUBB4AP04350 444 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 METTL7BQ6UX53 244 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 SLC9A9Q8IVB4 645 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 TMEM161BQ8NDZ6 487 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 SEPT1Q8WYJ6 367 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 EDEM3Q9BZQ6 932 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 POLR3FQ9H1D9 316 aaPredicted RBP24.58■■□□□ 1.52
HOMER3-204ENST00000539827 NHEJ1Q9H9Q4 299 aaPredicted RBP24.58■■□□□ 1.52
HOMER3-204ENST00000539827 CEP72Q9P209 647 aa24.58■■□□□ 1.52
HOMER3-204ENST00000539827 ACTN1P12814 892 aa24.57■■□□□ 1.52
HOMER3-204ENST00000539827 SLC9A1P19634 815 aa24.57■■□□□ 1.52
HOMER3-204ENST00000539827 TCF7P36402 384 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-204ENST00000539827 POLR2FP61218 127 aaKnown RBP24.57■■□□□ 1.52
HOMER3-204ENST00000539827 CST9Q5W186 159 aa24.57■■□□□ 1.52
HOMER3-204ENST00000539827 CBWD1Q9BRT8 395 aa24.57■■□□□ 1.52
HOMER3-204ENST00000539827 REXO2Q9Y3B8 237 aaKnown RBP24.57■■□□□ 1.52
HOMER3-204ENST00000539827 PLEKP08567 350 aaPredicted RBP24.56■■□□□ 1.52
HOMER3-204ENST00000539827 STAT5BP51692 787 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 GNG11P61952 73 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 EMC2Q15006 297 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 TMEM63BQ5T3F8 832 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 FAM160B1Q5W0V3 765 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 SLC17A8Q8NDX2 589 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 MORC4Q8TE76 937 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 COPS5Q92905 334 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 PTPN18Q99952 460 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 GANQ9H2C0 597 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 PDGFCQ9NRA1 345 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 TBX20Q9UMR3 447 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 PLAGL2Q9UPG8 496 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 DENND3A2RUS2 1198 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 HNRNPH3P31942 346 aaKnown RBP24.56■■□□□ 1.52
HOMER3-204ENST00000539827 POLGP54098 1239 aaPredicted RBP24.56■■□□□ 1.52
HOMER3-204ENST00000539827 KCNV1Q6PIU1 500 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 SPIRE2Q8WWL2 714 aa24.56■■□□□ 1.52
HOMER3-204ENST00000539827 ASB14A6NK59 587 aa24.55■■□□□ 1.52
HOMER3-204ENST00000539827 ZBTB48P10074 688 aaPredicted RBP24.55■■□□□ 1.52
HOMER3-204ENST00000539827 ADORA2AP29274 412 aa24.55■■□□□ 1.52
HOMER3-204ENST00000539827 CYLC1P35663 651 aaPredicted RBP24.55■■□□□ 1.52
HOMER3-204ENST00000539827 GCLCP48506 637 aaPredicted RBP24.55■■□□□ 1.52
HOMER3-204ENST00000539827 CDK17Q00537 523 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms