RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 NPEPPSP55786 919 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 TCEAL5Q5H9L2 206 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 ODR4Q5SWX8 454 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 PLA2G4FQ68DD2 849 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 DIS3L2Q8IYB7 885 aaKnown RBP18.83■□□□□ 0.6
DDB1-215ENST00000539712 UHRF1Q96T88 793 aaPredicted RBP18.83■□□□□ 0.6
DDB1-215ENST00000539712 NAP1L4Q99733 375 aaKnown RBP18.83■□□□□ 0.6
DDB1-215ENST00000539712 C11orf84Q9BUA3 381 aaPredicted RBP18.83■□□□□ 0.6
DDB1-215ENST00000539712 PLVAPQ9BX97 442 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 UBE2ZQ9H832 354 aaPredicted RBP18.83■□□□□ 0.6
DDB1-215ENST00000539712 RNF19AQ9NV58 838 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 RGL1Q9NZL6 768 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 PLAGL2Q9UPG8 496 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 PCDHB7Q9Y5E2 793 aa18.83■□□□□ 0.6
DDB1-215ENST00000539712 KIAA1671Q9BY89 1806 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 TNFRSF10AO00220 468 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 CSDE1O75534 798 aaKnown RBP18.82■□□□□ 0.6
DDB1-215ENST00000539712 P4HBP07237 508 aaKnown RBP18.82■□□□□ 0.6
DDB1-215ENST00000539712 FGFR4P22455 802 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 EPHA7Q15375 998 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 ALG13Q9NP73 1137 aaKnown RBP18.82■□□□□ 0.6
DDB1-215ENST00000539712 CYP26B1Q9NR63 512 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 TMEM161AQ9NX61 479 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 HCSTQ9UBK5 93 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 LRFN2Q9ULH4 789 aa18.82■□□□□ 0.6
DDB1-215ENST00000539712 FNDC1Q4ZHG4 1894 aaPredicted RBP18.82■□□□□ 0.6
DDB1-215ENST00000539712 ZBTB39O15060 712 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 ITGB1P05556 798 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 FGFR1P11362 822 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 TIGD5Q53EQ6 642 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 KSR1Q8IVT5 923 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 CCDC83Q8IWF9 413 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 SPPL3Q8TCT6 385 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 P2RX5Q93086 422 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 MTMR9Q96QG7 549 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 LMAN2LQ9H0V9 348 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 NSUN3Q9H649 340 aaKnown RBP18.81■□□□□ 0.6
DDB1-215ENST00000539712 ELAC1Q9H777 363 aaKnown RBP18.81■□□□□ 0.6
DDB1-215ENST00000539712 BRMS1Q9HCU9 246 aa18.81■□□□□ 0.6
DDB1-215ENST00000539712 SUCLA2Q9P2R7 463 aaPredicted RBP18.81■□□□□ 0.6
DDB1-215ENST00000539712 A0A087WZ62 844 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 SLITRK3O94933 977 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 IBSPP21815 317 aaPredicted RBP18.8■□□□□ 0.6
DDB1-215ENST00000539712 RBM25P49756 843 aaKnown RBP18.8■□□□□ 0.6
DDB1-215ENST00000539712 C4orf19Q8IY42 314 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 SLFN12Q8IYM2 578 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 KLHL23Q8NBE8 558 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 DYDC2Q96IM9 177 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 HSD17B14Q9BPX1 270 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 FDXACB1Q9BRP7 624 aaPredicted RBP18.8■□□□□ 0.6
DDB1-215ENST00000539712 LLPHQ9BRT6 129 aaKnown RBP18.8■□□□□ 0.6
DDB1-215ENST00000539712 LXNQ9BS40 222 aa18.8■□□□□ 0.6
DDB1-215ENST00000539712 DHX33Q9H6R0 707 aaKnown RBP18.8■□□□□ 0.6
DDB1-215ENST00000539712 TBKBP1A7MCY6 615 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 KCNA5P22460 613 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 CDC42EP1Q00587 391 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 GUCY1B3Q02153 619 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 CTTNQ14247 550 aaKnown RBP18.79■□□□□ 0.6
DDB1-215ENST00000539712 LEXMQ3ZCV2 418 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 NAALADL2Q58DX5 795 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 NCAPH2Q6IBW4 605 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 LRRC55Q6ZSA7 311 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 ZNF598Q86UK7 904 aaKnown RBP18.79■□□□□ 0.6
DDB1-215ENST00000539712 ECHDC2Q86YB7 292 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.79■□□□□ 0.6
DDB1-215ENST00000539712 NEK9Q8TD19 979 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 NLRP7Q8WX94 980 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 TMEM60Q9H2L4 133 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 CWH43Q9H720 699 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 ATP6V0A4Q9HBG4 840 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 IFT122Q9HBG6 1241 aa18.79■□□□□ 0.6
DDB1-215ENST00000539712 TYW1Q9NV66 732 aaKnown RBP18.79■□□□□ 0.6
DDB1-215ENST00000539712 A0A0U1RQF3 1178 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 ATF7P17544 494 aaPredicted RBP18.78■□□□□ 0.6
DDB1-215ENST00000539712 YWHABP31946 246 aaKnown RBP18.78■□□□□ 0.6
DDB1-215ENST00000539712 LTBRP36941 435 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 DNM2P50570 870 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 CYP4A11Q02928 519 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 HYAL1Q12794 435 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 CALCRLQ16602 461 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 CTC1Q2NKJ3 1217 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 RHPN2Q8IUC4 686 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 PABPC5Q96DU9 382 aaKnown RBP18.78■□□□□ 0.6
DDB1-215ENST00000539712 CEP170P1Q96L14 293 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 CASD1Q96PB1 797 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 GCOM2Q9BZD3 368 aaPredicted RBP18.78■□□□□ 0.6
DDB1-215ENST00000539712 ZSWIM4Q9H7M6 989 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 PCDHA12Q9UN75 941 aa18.78■□□□□ 0.6
DDB1-215ENST00000539712 MARCH6O60337 910 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 DKC1O60832 514 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDB1-215ENST00000539712 BAG4O95429 457 aaKnown RBP18.77■□□□□ 0.6
DDB1-215ENST00000539712 IRS1P35568 1242 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 TRIM29Q14134 588 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 CLLU1OSQ5K130 101 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 ZNF410Q86VK4 478 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 PRPF31Q8WWY3 499 aaKnown RBP18.77■□□□□ 0.6
DDB1-215ENST00000539712 TMEM143Q96AN5 459 aa18.77■□□□□ 0.6
DDB1-215ENST00000539712 ZSCAN31Q96LW9 406 aaPredicted RBP18.77■□□□□ 0.6
DDB1-215ENST00000539712 EIF2AK1Q9BQI3 630 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms