RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 NUBP1P53384 320 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 TBC1D8BQ0IIM8 1120 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 STK4Q13043 487 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 EMC2Q15006 297 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 IQCB1Q15051 598 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 STXBP4Q6ZWJ1 553 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 SMYD4Q8IYR2 804 aaPredicted RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 DAW1Q8N136 415 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 ADSSL1Q8N142 457 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 GUF1Q8N442 669 aaKnown RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 SLC17A8Q8NDX2 589 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 SH2D3AQ9BRG2 576 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 RNPEPQ9H4A4 650 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 CBX8Q9HC52 389 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 SLC39A2Q9NP94 309 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 XPNPEP3Q9NQH7 507 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 XPNPEP1Q9NQW7 623 aa11.78□□□□□ -0.52
LEMD3-202ENST00000539442 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
LEMD3-202ENST00000539442 IGKV6-21A0A0C4DH24 114 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 RRN3P2A6NIE6 340 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 BECN2A8MW95 431 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ZBTB42B2RXF5 422 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 HAS3O00219 553 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 EIF3DO15371 548 aaKnown RBP eCLIP11.77□□□□□ -0.53
LEMD3-202ENST00000539442 MAGEB2O15479 319 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 SCP2P22307 547 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ABCD1P33897 745 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 PRCPP42785 496 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 PURAQ00577 322 aaKnown RBP11.77□□□□□ -0.53
LEMD3-202ENST00000539442 MYL5Q02045 173 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 PAK1Q13153 545 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ALCAMQ13740 583 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 UVSSAQ2YD98 709 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ODR4Q5SWX8 454 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 FAM102BQ5T8I3 360 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 FOXR2Q6PJQ5 311 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 FAM178BQ8IXR5 827 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 PDCD7Q8N8D1 485 aaKnown RBP11.77□□□□□ -0.53
LEMD3-202ENST00000539442 RNF214Q8ND24 703 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ENOX1Q8TC92 643 aaKnown RBP11.77□□□□□ -0.53
LEMD3-202ENST00000539442 SPIRE2Q8WWL2 714 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 TCP11Q8WWU5 503 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 KAT2BQ92831 832 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ST6GALNAC4Q9H4F1 302 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.53
LEMD3-202ENST00000539442 RWDD2AQ9UIY3 292 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 UBE4BO95155 1302 aa11.77□□□□□ -0.53
LEMD3-202ENST00000539442 ARID2Q68CP9 1835 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 BICDL2A1A5D9 508 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 H0YCG3 227 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 GOLGA6L19H0YKK7 550 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MYL3P08590 195 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 HSPA8P11142 646 aaKnown RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 INSRRP14616 1297 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 CCNE1P24864 410 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 PSEN2P49810 448 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MRE11P49959 708 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 SMTNP53814 917 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 TPM4P67936 248 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 BEX3Q00994 111 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 PPFIA1Q13136 1202 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 DMP1Q13316 513 aaPredicted RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MFSD10Q14728 455 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 PPP2R5AQ15172 486 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 BMT2Q1RMZ1 405 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 GNASQ5JWF2 1037 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 IER5Q5VY09 327 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 KLHL10Q6JEL2 608 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MAEAQ7L5Y9 396 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 EPM2AIP1Q7L775 607 aaPredicted RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 DHX40Q8IX18 779 aaKnown RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MYOCDQ8IZQ8 938 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 AOPEPQ8N6M6 819 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 PCSK9Q8NBP7 692 aaKnown RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 RETREG2Q8NC44 543 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 KLHDC9Q8NEP7 349 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 NELFBQ8WX92 580 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 KCNN1Q92952 543 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 HPS3Q969F9 1004 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 IFT74Q96LB3 600 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 POLR3FQ9H1D9 316 aaPredicted RBP11.76□□□□□ -0.53
LEMD3-202ENST00000539442 GRPEL1Q9HAV7 217 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 GPRC5CQ9NQ84 441 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
LEMD3-202ENST00000539442 MYADML2A6NDP7 307 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 SFI1A8K8P3 1242 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 K7ENM7 598 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 GCNT3O95395 438 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 C22orf31O95567 290 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 PGK1P00558 417 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 ARL2P36404 184 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 NAMPTP43490 491 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms