RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-210	ENST00000539303	OBP2A	Q9NY56	170 aa		4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	ARHGAP20	Q9P2F6	1191 aa		4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	EVL	Q9UI08	416 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	PRSS50	Q9UI38	385 aa		4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	DENND2A	Q9ULE3	1009 aa		4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	NUMBL	Q9Y6R0	609 aa		4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	IRS2	Q9Y4H2	1338 aa		4.11	□□□□□ -1.75
SNHG1-210	ENST00000539303	ST20-MTHFS	A0A0A6YYL1	179 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	ABLIM1	O14639	778 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	AP1G1	O43747	822 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	OPHN1	O60890	802 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	PEX14	O75381	377 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	CYP2C8	P10632	490 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	NCAM1	P13591	858 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	ITGB5	P18084	799 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	MRPS9	P82933	396 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	TMEM62	Q0P6H9	643 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	SMAD4	Q13485	552 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	CXorf57	Q6NSI4	855 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	B3GNT9	Q6UX72	402 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	ZC3H18	Q86VM9	953 aa	Known RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	BCL6B	Q8N143	479 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	CPA5	Q8WXQ8	436 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	AUTS2	Q8WXX7	1259 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	E2F7	Q96AV8	911 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	OR10A5	Q9H207	317 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	DLL4	Q9NR61	685 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	KCND1	Q9NSA2	647 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	KCNG1	Q9UIX4	513 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	CDY2A	Q9Y6F7	541 aa		4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.1	□□□□□ -1.75
SNHG1-210	ENST00000539303		A0A0A6YYK5	440 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303		A6NNZ2	444 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	N4BP3	O15049	544 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	KIF3B	O15066	747 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	PLA2G1B	P04054	148 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	EDNRB	P24530	442 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	IGFBP6	P24592	240 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	APEX1	P27695	318 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	CYP2C19	P33261	490 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	STIL	Q15468	1287 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	GFOD2	Q3B7J2	385 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	UAP1L1	Q3KQV9	507 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	IFIT1B	Q5T764	474 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	MBNL2	Q5VZF2	373 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	LILRA6	Q6PI73	481 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	KSR2	Q6VAB6	950 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	B3GNT8	Q7Z7M8	397 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	OR5AN1	Q8NGI8	311 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	OR2I1P	Q8NGU4	316 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	OR14C36	Q8NHC7	312 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	CALML6	Q8TD86	181 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	GAB3	Q8WWW8	586 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	COA7	Q96BR5	231 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	RUNDC1	Q96C34	613 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	CCDC136	Q96JN2	1154 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	TAAR9	Q96RI9	348 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	NOL10	Q9BSC4	688 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	SOX7	Q9BT81	388 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	BTBD2	Q9BX70	525 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	ACE2	Q9BYF1	805 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	RNF38	Q9H0F5	515 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	GCM1	Q9NP62	436 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	GEMIN8	Q9NWZ8	242 aa	Known RBP	4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	SIRT5	Q9NXA8	310 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	CROT	Q9UKG9	612 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303	LIMCH1	Q9UPQ0	1083 aa		4.09	□□□□□ -1.75
SNHG1-210	ENST00000539303		A0A0A6YYJ9	748 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	HRK	O00198	91 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	COL6A1	P12109	1028 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	ADK	P55263	362 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	FOXO4	P98177	505 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	SPIDR	Q14159	915 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	ADRM1	Q16186	407 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	MLANA	Q16655	118 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	C3orf36	Q3SXR2	165 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	MINDY4	Q4G0A6	757 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	ARHGAP29	Q52LW3	1261 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	DGKH	Q86XP1	1220 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	COL23A1	Q86Y22	540 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	GRAMD1C	Q8IYS0	662 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	MIER2	Q8N344	545 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	ZBTB34	Q8NCN2	500 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	PPP1R35	Q8TAP8	253 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	MZB1	Q8WU39	189 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	NRG4	Q8WWG1	115 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	RIN2	Q8WYP3	895 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	DPF2	Q92785	391 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	RPGR	Q92834	1020 aa	Known RBP	4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	RAB24	Q969Q5	203 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	RELT	Q969Z4	430 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	ZBTB8A	Q96BR9	441 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	RAX2	Q96IS3	184 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	AIFM3	Q96NN9	605 aa		4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	NUP88	Q99567	741 aa	Predicted RBP	4.08	□□□□□ -1.76
SNHG1-210	ENST00000539303	ACO2	Q99798	780 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms