RNA–Protein interactions for RNA: ENST00000538345.1

DDX11-211, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 498 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-211ENST00000538345 GPM6BQ13491 265 aa13.66□□□□□ -0.22
DDX11-211ENST00000538345 CTTNQ14247 550 aaKnown RBP13.66□□□□□ -0.22
DDX11-211ENST00000538345 RABEP1Q15276 862 aa13.66□□□□□ -0.22
DDX11-211ENST00000538345 FBXO18Q8NFZ0 1043 aa13.66□□□□□ -0.22
DDX11-211ENST00000538345 CLP1Q92989 425 aaKnown RBP13.66□□□□□ -0.22
DDX11-211ENST00000538345 MTMR9Q96QG7 549 aa13.66□□□□□ -0.22
DDX11-211ENST00000538345 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
DDX11-211ENST00000538345 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
DDX11-211ENST00000538345 C5orf67F2Z3F1 127 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 DARSP14868 501 aaKnown RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 TXKP42681 527 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 HMGN5P82970 282 aaKnown RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 SAFBQ15424 915 aaKnown RBP eCLIP13.65□□□□□ -0.22
DDX11-211ENST00000538345 TJAP1Q5JTD0 557 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 ODR4Q5SWX8 454 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 SLC24A5Q71RS6 500 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 KSR1Q8IVT5 923 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 C4orf19Q8IY42 314 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 CMTR2Q8IYT2 770 aaKnown RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 ATXN2LQ8WWM7 1075 aaKnown RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 NLRP7Q8WX94 980 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 SCLT1Q96NL6 688 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 EIF2AK1Q9BQI3 630 aaKnown RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 TTC12Q9H892 705 aaPredicted RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 C1orf112Q9NSG2 853 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 BMP2KQ9NSY1 1161 aaPredicted RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 SUCLA2Q9P2R7 463 aaPredicted RBP13.65□□□□□ -0.22
DDX11-211ENST00000538345 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.22
DDX11-211ENST00000538345 A0A087WZ62 844 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 POTEMA6NI47 508 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 GRM6O15303 877 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 SLITRK3O94933 977 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 YWHABP31946 246 aaKnown RBP13.64□□□□□ -0.23
DDX11-211ENST00000538345 MCM7P33993 719 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 BMPR1AP36894 532 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 KCNQ1P51787 676 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
DDX11-211ENST00000538345 FAM102BQ5T8I3 360 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 RHPN2Q8IUC4 686 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 TPH2Q8IWU9 490 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 FAM184AQ8NB25 1140 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 MRPL38Q96DV4 380 aaKnown RBP13.64□□□□□ -0.23
DDX11-211ENST00000538345 CEP170P1Q96L14 293 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 ASB2Q96Q27 587 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
DDX11-211ENST00000538345 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
DDX11-211ENST00000538345 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
DDX11-211ENST00000538345 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 LRFN2Q9ULH4 789 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
DDX11-211ENST00000538345 DKC1O60832 514 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX11-211ENST00000538345 FGFR1P11362 822 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 DNM2P50570 870 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
DDX11-211ENST00000538345 FAM189BP81408 668 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 NBR1Q14596 966 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 TMEM143Q96AN5 459 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 NLRP4Q96MN2 994 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 HSD17B14Q9BPX1 270 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 TSHZ2Q9NRE2 1034 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 RNF19AQ9NV58 838 aa13.63□□□□□ -0.23
DDX11-211ENST00000538345 A0A087WWV3 80 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 TBKBP1A7MCY6 615 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 ST18O60284 1047 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 CSPG5O95196 566 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 RB1P06400 928 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
DDX11-211ENST00000538345 EMC2Q15006 297 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 ZNF174Q15697 407 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 PTPROQ16827 1216 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 XKR9Q5GH70 373 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 ZNF410Q86VK4 478 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 SLC7A3Q8WY07 619 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 C11orf84Q9BUA3 381 aaPredicted RBP13.62□□□□□ -0.23
DDX11-211ENST00000538345 GCOM2Q9BZD3 368 aaPredicted RBP13.62□□□□□ -0.23
DDX11-211ENST00000538345 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
DDX11-211ENST00000538345 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
DDX11-211ENST00000538345 XPNPEP1Q9NQW7 623 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 TMEM161AQ9NX61 479 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 COL4A3BPQ9Y5P4 624 aa13.62□□□□□ -0.23
DDX11-211ENST00000538345 LYPLA2O95372 231 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 ITGB1P05556 798 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 ZSCAN20P17040 1043 aaPredicted RBP13.61□□□□□ -0.23
DDX11-211ENST00000538345 DNAJB1P25685 340 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 RFC5P40937 340 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 CAMK1Q14012 370 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 TIGD5Q53EQ6 642 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 TCEAL5Q5H9L2 206 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 TTC38Q5R3I4 469 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 FAM43BQ6ZT52 329 aaPredicted RBP13.61□□□□□ -0.23
DDX11-211ENST00000538345 ECHDC2Q86YB7 292 aa13.61□□□□□ -0.23
DDX11-211ENST00000538345 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms