RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CBWD6Q4V339 395 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 CBWD3Q5JTY5 395 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 CBWD5Q5RIA9 395 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 PSMB7Q99436 277 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 ZMYND15Q9H091 742 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 LARSQ9P2J5 1176 aaKnown RBP15.31■□□□□ 0.04
LIMK1-208ENST00000538333 ZNF112Q9UJU3 913 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 FRMD4BQ9Y2L6 1034 aa15.31■□□□□ 0.04
LIMK1-208ENST00000538333 K7ENM7 598 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 ATP9AO75110 1047 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 ZBED4O75132 1171 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 BACE1P56817 501 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 RNF207Q6ZRF8 634 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 OLIG1Q8TAK6 271 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 ATG4CQ96DT6 458 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 RMDN3Q96TC7 470 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 KIAA1217Q5T5P2 1943 aa15.3■□□□□ 0.04
LIMK1-208ENST00000538333 GRID2IPA4D2P6 1211 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 NAP1L1P55209 391 aaKnown RBP15.29■□□□□ 0.04
LIMK1-208ENST00000538333 ALCAMQ13740 583 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 UGCGQ16739 394 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 MEI1Q5TIA1 1274 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 REPS2Q8NFH8 660 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 SMARCAL1Q9NZC9 954 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 SAMM50Q9Y512 469 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 RIPK3Q9Y572 518 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
LIMK1-208ENST00000538333 CCNE2O96020 404 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 TRIM49P0CI25 452 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 TRIM49CP0CI26 452 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 PLS3P13797 630 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 YWHABP31946 246 aaKnown RBP15.29■□□□□ 0.04
LIMK1-208ENST00000538333 BFSP1Q12934 665 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 DCAF15Q66K64 600 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 ALKBH5Q6P6C2 394 aaKnown RBP15.29■□□□□ 0.04
LIMK1-208ENST00000538333 MTFR1LQ9H019 292 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 ZCCHC17Q9NP64 241 aaKnown RBP15.29■□□□□ 0.04
LIMK1-208ENST00000538333 PRDM4Q9UKN5 801 aa15.29■□□□□ 0.04
LIMK1-208ENST00000538333 F8VZ95 297 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 POLR3GO15318 223 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-208ENST00000538333 FTCDO95954 541 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 MYBL2P10244 700 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 MYCLP12524 364 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-208ENST00000538333 PTPRAP18433 802 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 C12orf56Q8IXR9 622 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 SYCP3Q8IZU3 236 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 GPR88Q9GZN0 384 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 ST6GALNAC4Q9H4F1 302 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 TMEM206Q9H813 350 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 RNF14Q9UBS8 474 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 TMEM150BA6NC51 233 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 EVI5O60447 810 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 EXOC3O60645 756 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 ZMYND10O75800 440 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 FERP16591 822 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 STAT1P42224 750 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 PLS1Q14651 629 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 MAP9Q49MG5 647 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 NSMFQ6X4W1 530 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 CCNI2Q6ZMN8 369 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-208ENST00000538333 ZNF280CQ8ND82 737 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 RUBCNQ92622 972 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 ZKSCAN4Q969J2 545 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-208ENST00000538333 C12orf42Q96LP6 360 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 RNF146Q9NTX7 359 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 ADAMTS5Q9UNA0 930 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 BCS1LQ9Y276 419 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 CTDP1Q9Y5B0 961 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-208ENST00000538333 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
LIMK1-208ENST00000538333 WDR64B1ANS9 1081 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 TISP43B9A030 160 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 DDX3XO00571 662 aaKnown RBP eCLIP15.27■□□□□ 0.04
LIMK1-208ENST00000538333 BACH1O14867 736 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 SFNP31947 248 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 SOX5P35711 763 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 JAK3P52333 1124 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 PSMC5P62195 406 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 GTF2BQ00403 316 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 BAATQ14032 418 aaPredicted RBP15.27■□□□□ 0.04
LIMK1-208ENST00000538333 CCDC181Q5TID7 509 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 ARHGEF16Q5VV41 709 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 LMO3Q8TAP4 145 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 HDAC7Q8WUI4 952 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 MS4A14Q96JA4 679 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 SH2D3AQ9BRG2 576 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 SYT11Q9BT88 431 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 LRRC1Q9BTT6 524 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 TIPINQ9BVW5 301 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 INTS2Q9H0H0 1204 aaKnown RBP15.27■□□□□ 0.04
LIMK1-208ENST00000538333 VIPAS39Q9H9C1 493 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 DNAJC12Q9UKB3 198 aa15.27■□□□□ 0.04
LIMK1-208ENST00000538333 GFPT2O94808 682 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 PAFAH1B1P43034 410 aa15.26■□□□□ 0.03
LIMK1-208ENST00000538333 MYL7Q01449 175 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms