RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ANKEF1Q9NU02 776 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 ADAMTS1Q9UHI8 967 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 SALL4Q9UJQ4 1053 aa17.11■□□□□ 0.33
MKS1-204ENST00000537529 PARP14Q460N5 1801 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
MKS1-204ENST00000537529 BUB1O43683 1085 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 SASH3O75995 380 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 FERP16591 822 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 VSNL1P62760 191 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 PLS1Q14651 629 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 ZNF572Q7Z3I7 529 aaPredicted RBP17.1■□□□□ 0.33
MKS1-204ENST00000537529 SLC17A8Q8NDX2 589 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 OSBPL9Q96SU4 736 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 SGIP1Q9BQI5 828 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 PRDM10Q9NQV6 1147 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 TMOD4Q9NZQ9 345 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
MKS1-204ENST00000537529 BTNL10A8MVZ5 291 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 KRT13P13646 458 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 MYL7Q01449 175 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 ITIH3Q06033 890 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 UGCGQ16739 394 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 KIAA0753Q2KHM9 967 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 BEND6Q5SZJ8 279 aaPredicted RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 CCDC70Q6NSX1 233 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 ZNF746Q6NUN9 644 aaPredicted RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 ZNF571Q7Z3V5 609 aaPredicted RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 VSIG10LQ86VR7 867 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 CREG2Q8IUH2 290 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 ST6GALNAC4Q9H4F1 302 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 ADAMTS5Q9UNA0 930 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 PHIPQ8WWQ0 1821 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 PDE2AO00408 941 aaPredicted RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 BACH1O14867 736 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 MAFGO15525 162 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 ATP9AO75110 1047 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 CCNE2O96020 404 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 NR3C2P08235 984 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 STAT1P42224 750 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 BFSP1Q12934 665 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 R3HDM1Q15032 1099 aaKnown RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 C12orf56Q8IXR9 622 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 TMEM174Q8WUU8 243 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 IWS1Q96ST2 819 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 SENP7Q9BQF6 1050 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 GGA3Q9NZ52 723 aa17.09■□□□□ 0.33
MKS1-204ENST00000537529 AJAP1Q9UKB5 411 aaPredicted RBP17.09■□□□□ 0.33
MKS1-204ENST00000537529 ATP2A1O14983 1001 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 SNRPFP62306 86 aaKnown RBP17.08■□□□□ 0.33
MKS1-204ENST00000537529 NOL9Q5SY16 702 aaKnown RBP17.08■□□□□ 0.33
MKS1-204ENST00000537529 NFRKBQ6P4R8 1299 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 HDXQ7Z353 690 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 NSUN6Q8TEA1 469 aaKnown RBP17.08■□□□□ 0.33
MKS1-204ENST00000537529 KLRG1Q96E93 195 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 MAF1Q9H063 256 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 INTS2Q9H0H0 1204 aaKnown RBP17.08■□□□□ 0.33
MKS1-204ENST00000537529 ABCB6Q9NP58 842 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.33
MKS1-204ENST00000537529 ZNF214Q9UL59 606 aaPredicted RBP17.08■□□□□ 0.33
MKS1-204ENST00000537529 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 KLRC1P26715 233 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 XKR9Q5GH70 373 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 CCDC181Q5TID7 509 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 INTS8Q75QN2 995 aaKnown RBP17.08■□□□□ 0.32
MKS1-204ENST00000537529 COG1Q8WTW3 980 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 INPP4AQ96PE3 977 aaPredicted RBP17.08■□□□□ 0.32
MKS1-204ENST00000537529 TLR10Q9BXR5 811 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 MOV10L1Q9BXT6 1211 aaKnown RBP17.08■□□□□ 0.32
MKS1-204ENST00000537529 TEX13BQ9BXU2 312 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 PCDHGC5Q9Y5F6 944 aa17.08■□□□□ 0.32
MKS1-204ENST00000537529 NCK2O43639 380 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 DKC1O60832 514 aaKnown RBP eCLIP17.07■□□□□ 0.32
MKS1-204ENST00000537529 N4BP1O75113 896 aaKnown RBP17.07■□□□□ 0.32
MKS1-204ENST00000537529 PALMO75781 387 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 GFPT2O94808 682 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 RFX1P22670 979 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 SOX5P35711 763 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 PAFAH1B1P43034 410 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 GTF2BQ00403 316 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 IFI16Q16666 785 aaKnown RBP17.07■□□□□ 0.32
MKS1-204ENST00000537529 UTP14CQ5TAP6 766 aaKnown RBP17.07■□□□□ 0.32
MKS1-204ENST00000537529 GJB7Q6PEY0 223 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 HAUS6Q7Z4H7 955 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 MMGT1Q8N4V1 131 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 PACSIN1Q9BY11 444 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 STK33Q9BYT3 514 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 ACAD9Q9H845 621 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
MKS1-204ENST00000537529 NAGPAQ9UK23 515 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
MKS1-204ENST00000537529 MYPNQ86TC9 1320 aa17.06■□□□□ 0.32
MKS1-204ENST00000537529 F8VZ95 297 aa17.06■□□□□ 0.32
MKS1-204ENST00000537529 MAP2K7O14733 419 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms