RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TMEM143Q96AN5 459 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 POLR3CQ9BUI4 534 aaPredicted RBP19.33■□□□□ 0.68
GPN3-202ENST00000537466 TSPYL2Q9H2G4 693 aaPredicted RBP19.33■□□□□ 0.68
GPN3-202ENST00000537466 TUFT1Q9NNX1 390 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 PPME1Q9Y570 386 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 INSL6Q9Y581 213 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 TRANK1O15050 2925 aa19.33■□□□□ 0.68
GPN3-202ENST00000537466 A0A087WZ62 844 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 GPR182O15218 404 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 SYT1P21579 422 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 EIF4BP23588 611 aaKnown RBP19.32■□□□□ 0.68
GPN3-202ENST00000537466 RARRES1P49788 294 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 EMC2Q15006 297 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 POTEGQ6S5H5 508 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 ZNF710Q8N1W2 664 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 SCLT1Q96NL6 688 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 JPH2Q9BR39 696 aaPredicted RBP19.32■□□□□ 0.68
GPN3-202ENST00000537466 FDXACB1Q9BRP7 624 aaPredicted RBP19.32■□□□□ 0.68
GPN3-202ENST00000537466 XPNPEP1Q9NQW7 623 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 ANKEF1Q9NU02 776 aa19.32■□□□□ 0.68
GPN3-202ENST00000537466 LINC01553A4QN01 128 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 EPOPA6NHQ4 379 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 LAD1O00515 517 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 CSDE1O75534 798 aaKnown RBP19.31■□□□□ 0.68
GPN3-202ENST00000537466 DARSP14868 501 aaKnown RBP19.31■□□□□ 0.68
GPN3-202ENST00000537466 PDCP20941 246 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 FGFR4P22455 802 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 RPA1P27694 616 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 ATP2C1P98194 919 aaPredicted RBP19.31■□□□□ 0.68
GPN3-202ENST00000537466 CRIPAKQ8N1N5 446 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 IGSF22Q8N9C0 903 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 ERMNQ8TAM6 284 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 SP7Q8TDD2 431 aaPredicted RBP19.31■□□□□ 0.68
GPN3-202ENST00000537466 YME1L1Q96TA2 773 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 LRWD1Q9UFC0 647 aa19.31■□□□□ 0.68
GPN3-202ENST00000537466 RFXAPO00287 272 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 FOSL2P15408 326 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 PRPHP41219 470 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 PDIA5Q14554 519 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 ECM1Q16610 540 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 ODR4Q5SWX8 454 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 EXOC8Q8IYI6 725 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 NLRP4Q96MN2 994 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 MTRQ99707 1265 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 ADAM2Q99965 735 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 COL4A3BPQ9Y5P4 624 aa19.3■□□□□ 0.68
GPN3-202ENST00000537466 PP2D1A8MPX8 630 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 XRCC6P12956 609 aaKnown RBP eCLIP19.29■□□□□ 0.68
GPN3-202ENST00000537466 ADGRE1Q14246 886 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 DSC3Q14574 896 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 BRAPQ7Z569 592 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 HSCBQ8IWL3 235 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 PRPF31Q8WWY3 499 aaKnown RBP19.29■□□□□ 0.68
GPN3-202ENST00000537466 ARNTL2Q8WYA1 636 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 GCOM2Q9BZD3 368 aaPredicted RBP19.29■□□□□ 0.68
GPN3-202ENST00000537466 RC3H2Q9HBD1 1191 aaKnown RBP19.29■□□□□ 0.68
GPN3-202ENST00000537466 RGS18Q9NS28 235 aa19.29■□□□□ 0.68
GPN3-202ENST00000537466 DENND3A2RUS2 1198 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 IBSPP21815 317 aaPredicted RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 CDC25AP30304 524 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 CCT6AP40227 531 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 CDC42EP1Q00587 391 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 HAUS3Q68CZ6 603 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 DTHD1Q6ZMT9 781 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 ZNF410Q86VK4 478 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 PSPC1Q8WXF1 523 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 CCDC43Q96MW1 224 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 GAS2L1Q99501 681 aaPredicted RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 ATP6V0A4Q9HBG4 840 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 IFT122Q9HBG6 1241 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 MTUS1Q9ULD2 1270 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 REV3LO60673 3130 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 C9IYK1 514 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 GAS2O43903 313 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 USO1O60763 962 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 DGAT1O75907 488 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 DGKIO75912 1065 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 SARSP49591 514 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 LAMTOR4Q0VGL1 99 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 RESTQ13127 1097 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 NPAS4Q8IUM7 802 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 TCP11Q8WWU5 503 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 ZNF689Q96CS4 500 aaPredicted RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 NACC1Q96RE7 527 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 RAB34Q9BZG1 259 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 DBR1Q9UK59 544 aaKnown RBP19.28■□□□□ 0.68
GPN3-202ENST00000537466 MTMR6Q9Y217 621 aa19.28■□□□□ 0.68
GPN3-202ENST00000537466 ATG2AQ2TAZ0 1938 aa19.27■□□□□ 0.68
GPN3-202ENST00000537466 SRGAP2CP0DJJ0 459 aa19.27■□□□□ 0.67
GPN3-202ENST00000537466 ERVK-21P61565 698 aa19.27■□□□□ 0.67
GPN3-202ENST00000537466 SLC24A5Q71RS6 500 aa19.27■□□□□ 0.67
GPN3-202ENST00000537466 TGS1Q96RS0 853 aaKnown RBP19.27■□□□□ 0.67
GPN3-202ENST00000537466 C17orf80Q9BSJ5 609 aa19.27■□□□□ 0.67
GPN3-202ENST00000537466 MMTAG2Q9BU76 263 aaKnown RBP19.27■□□□□ 0.67
GPN3-202ENST00000537466 C1orf112Q9NSG2 853 aa19.27■□□□□ 0.67
GPN3-202ENST00000537466 ADGRA3Q8IWK6 1321 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 VWA3AA6NCI4 1184 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 MUTP22033 750 aa19.26■□□□□ 0.67
GPN3-202ENST00000537466 GATMP50440 423 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms