RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 CLUL1Q15846 466 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 UGCGQ16739 394 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 OTUD6AQ7L8S5 288 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 FAM228AQ86W67 206 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 THNSL1Q8IYQ7 743 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.41□□□□□ -0.9
DDB1-208ENST00000537120 SPPL3Q8TCT6 385 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 POF1BQ8WVV4 589 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 P2RX5Q93086 422 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 FAM20AQ96MK3 541 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 SH2D3AQ9BRG2 576 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 NIFKQ9BYG3 293 aaKnown RBP9.41□□□□□ -0.9
DDB1-208ENST00000537120 INO80BQ9C086 356 aaPredicted RBP9.41□□□□□ -0.9
DDB1-208ENST00000537120 TLE6Q9H808 572 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 TYW1Q9NV66 732 aaKnown RBP9.41□□□□□ -0.9
DDB1-208ENST00000537120 TMEM161AQ9NX61 479 aa9.41□□□□□ -0.9
DDB1-208ENST00000537120 SUCLA2Q9P2R7 463 aaPredicted RBP9.41□□□□□ -0.9
DDB1-208ENST00000537120 NLRC5Q86WI3 1866 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 STK36Q9NRP7 1315 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 COL4A4P53420 1690 aaPredicted RBP9.4□□□□□ -0.9
DDB1-208ENST00000537120 GRXCR2A6NFK2 248 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 C9IYK1 514 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 EDIL3O43854 480 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 MMP1P03956 469 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 ITGB1P05556 798 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 FGFR1P11362 822 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 COL9A1P20849 921 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 FGFR4P22455 802 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 NDUFV1P49821 464 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 GPC3P51654 580 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 FAM189BP81408 668 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 KRT17Q04695 432 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 SAFBQ15424 915 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDB1-208ENST00000537120 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 NCAPH2Q6IBW4 605 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 RBM23Q86U06 439 aaKnown RBP9.4□□□□□ -0.9
DDB1-208ENST00000537120 RHPN2Q8IUC4 686 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 GJD3Q8N144 294 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 TMEM87AQ8NBN3 555 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 CEP170P1Q96L14 293 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 TMEM117Q9H0C3 514 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 ADAMTS10Q9H324 1103 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 ELAC1Q9H777 363 aaKnown RBP9.4□□□□□ -0.9
DDB1-208ENST00000537120 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 DACT1Q9NYF0 836 aa9.4□□□□□ -0.9
DDB1-208ENST00000537120 A0A087WZ62 844 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 TMEM150BA6NC51 233 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 M0R2N6 131 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 SLC37A4O43826 429 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 CSDE1O75534 798 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 SRGAP2CP0DJJ0 459 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 DARSP14868 501 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 IL9P15248 144 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 LAG3P18627 525 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 SFPQP23246 707 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDB1-208ENST00000537120 CA8P35219 290 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 NRIP1P48552 1158 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 POLGP54098 1239 aaPredicted RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 NCBP1Q09161 790 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 HYAL1Q12794 435 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 DSC3Q14574 896 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 BMS1Q14692 1282 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 EPHA7Q15375 998 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 TWF2Q6IBS0 349 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 PPP4R3AQ6IN85 833 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 CATSPER4Q7RTX7 472 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 FAM178BQ8IXR5 827 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 ETNPPLQ8TBG4 499 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 NEK9Q8TD19 979 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 SLC7A3Q8WY07 619 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 NLRP4Q96MN2 994 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 CCDC43Q96MW1 224 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 MBOAT7Q96N66 472 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 EPHX3Q9H6B9 360 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 RC3H2Q9HBD1 1191 aaKnown RBP9.39□□□□□ -0.91
DDB1-208ENST00000537120 CYP26B1Q9NR63 512 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 PCDHA12Q9UN75 941 aa9.39□□□□□ -0.91
DDB1-208ENST00000537120 RALGAPA2Q2PPJ7 1873 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 EML1O00423 815 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 TBX3O15119 743 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 MAFO75444 373 aaPredicted RBP9.38□□□□□ -0.91
DDB1-208ENST00000537120 FGF18O76093 207 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 CTDNEP1O95476 244 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 EOMESO95936 686 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 SKIP12755 728 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 ATP2B1P20020 1258 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 DNAJB1P25685 340 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 GTF2F1P35269 517 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDB1-208ENST00000537120 NPEPPSP55786 919 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 UBE3AQ05086 875 aa9.38□□□□□ -0.91
DDB1-208ENST00000537120 RNASELQ05823 741 aaKnown RBP9.38□□□□□ -0.91
DDB1-208ENST00000537120 NR5A1Q13285 461 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms