RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 ATXN2LQ8WWM7 1075 aaKnown RBP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CASKIN2Q8WXE0 1202 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 LZTS2Q9BRK4 669 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 TRIM9Q9C026 710 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 KDM4CQ9H3R0 1056 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CENPHQ9H3R5 247 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 EPHX3Q9H6B9 360 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 RIC8AQ9NPQ8 531 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 CEP72Q9P209 647 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 PLAAQ9Y263 795 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.49□□□□□ -1.05
CPSF7-216ENST00000536548 ATP8B3O60423 1300 aa8.49□□□□□ -1.05
CPSF7-216ENST00000536548 MAST2Q6P0Q8 1798 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 hCG_1642624A0A1W2PR95 340 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 TRAPPC3O43617 180 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 NCK2O43639 380 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 GNA14O95837 355 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 HMGCRP04035 888 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 GLI1P08151 1106 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 GSTA1P08263 222 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 PLCG1P19174 1290 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 ANXA13P27216 316 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 EIF3BP55884 814 aaKnown RBP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 PPP2R2AP63151 447 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 SMAD3P84022 425 aaKnown RBP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 ASTE1Q2TB18 679 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 MEI1Q5TIA1 1274 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 GKAP1Q5VSY0 366 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 CYB5D1Q6P9G0 228 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 POTEEQ6S8J3 1075 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 UNC13DQ70J99 1090 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 SV2BQ7L1I2 683 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 CCHCR1Q8TD31 782 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 PIK3R5Q8WYR1 880 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 BAP1Q92560 729 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 CENPTQ96BT3 561 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 INPP4AQ96PE3 977 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 KRT12Q99456 494 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 ATP6V0A4Q9HBG4 840 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 ARPP21Q9UBL0 812 aaPredicted RBP8.48□□□□□ -1.05
CPSF7-216ENST00000536548 PCDHGC5Q9Y5F6 944 aa8.48□□□□□ -1.05
CPSF7-216ENST00000536548 CFAP73A6NFT4 308 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 PALMO75781 387 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 PLEKP08567 350 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 CXCR5P32302 372 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 TNNI2P48788 182 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 GUCY2FP51841 1108 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 XRCC4Q13426 336 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 GRM4Q14833 912 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 SEPT2Q15019 361 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 RPS6KA1Q15418 735 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 CCDC85BQ15834 202 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 CLUL1Q15846 466 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 GRIK5Q16478 980 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 PPP2R5EQ16537 467 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 SBK1Q52WX2 424 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 ANKRD20A8PQ5CZ79 823 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 HOOK3Q86VS8 718 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 TEX11Q8IYF3 940 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 ANKRD13CQ8N6S4 541 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 ANKS4BQ8N8V4 417 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 CCDC26Q8TAB7 109 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 ACTRT1Q8TDG2 376 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 LMBR1Q8WVP7 490 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 ANKS1AQ92625 1134 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 N4BP2L2Q92802 583 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 COA7Q96BR5 231 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 MTMR8Q96EF0 704 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 RIOK1Q9BRS2 568 aaKnown RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 RAB34Q9BZG1 259 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 CRNKL1Q9BZJ0 848 aaKnown RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 SLITRK6Q9H5Y7 841 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 CD248Q9HCU0 757 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 BATF3Q9NR55 127 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 FAM114A2Q9NRY5 505 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 FAM207AQ9NSI2 230 aaPredicted RBP8.47□□□□□ -1.05
CPSF7-216ENST00000536548 THEGQ9P2T0 379 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 FLT1P17948 1338 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 PLXNB2O15031 1838 aa8.47□□□□□ -1.05
CPSF7-216ENST00000536548 MYH8P13535 1937 aa8.46□□□□□ -1.05
CPSF7-216ENST00000536548 GOLGA6L10A0A0M3HER8 536 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 M0R2N6 131 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 PGRMC1O00264 195 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 RAD51CO43502 376 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 BUB1O43683 1085 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 FAM153BP0C7A2 387 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 IL1R1P14778 569 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 HPDP32754 393 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CTNNA1P35221 906 aaKnown RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 HSD17B3P37058 310 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SLC1A4P43007 532 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 CRKP46108 304 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SEC24CP53992 1094 aa8.46□□□□□ -1.06
CPSF7-216ENST00000536548 ATN1P54259 1190 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-216ENST00000536548 SLC8A3P57103 927 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms