RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 REV3LO60673 3130 aa14.72□□□□□ -0.05
PRKDC-206ENST00000536429 A0A087WZ62 844 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 DARSP14868 501 aaKnown RBP14.71□□□□□ -0.05
PRKDC-206ENST00000536429 IGFBP4P22692 258 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 EIF4BP23588 611 aaKnown RBP14.71□□□□□ -0.05
PRKDC-206ENST00000536429 GATMP50440 423 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 POLGP54098 1239 aaPredicted RBP14.71□□□□□ -0.05
PRKDC-206ENST00000536429 DSC3Q14574 896 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 ECM1Q16610 540 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 RHPN2Q8IUC4 686 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 NEK9Q8TD19 979 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 SCLT1Q96NL6 688 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 GAS2L1Q99501 681 aaPredicted RBP14.71□□□□□ -0.05
PRKDC-206ENST00000536429 ADAM2Q99965 735 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 FDXACB1Q9BRP7 624 aaPredicted RBP14.71□□□□□ -0.05
PRKDC-206ENST00000536429 XPNPEP1Q9NQW7 623 aa14.71□□□□□ -0.05
PRKDC-206ENST00000536429 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.71□□□□□ -0.05
PRKDC-206ENST00000536429 XIRP2A4UGR9 3374 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 GPR182O15218 404 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 LPXNO60711 386 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 LINC00271P0C7V0 271 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 ERVK-21P61565 698 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 EMC2Q15006 297 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 POTEGQ6S5H5 508 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 OTUD6AQ7L8S5 288 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 GDPD5Q8WTR4 605 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 PRPF31Q8WWY3 499 aaKnown RBP14.7□□□□□ -0.06
PRKDC-206ENST00000536429 SLC7A3Q8WY07 619 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 NLRP4Q96MN2 994 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 TGS1Q96RS0 853 aaKnown RBP14.7□□□□□ -0.06
PRKDC-206ENST00000536429 RGS18Q9NS28 235 aa14.7□□□□□ -0.06
PRKDC-206ENST00000536429 COL4A6Q14031 1691 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 PP2D1A8MPX8 630 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 K7ELQ4 463 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-206ENST00000536429 DGKIO75912 1065 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 RFC5P40937 340 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 RARRES1P49788 294 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 DNM2P50570 870 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.062e-10■■■■□ 21.3
PRKDC-206ENST00000536429 GRB10Q13322 594 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 FERMT3Q86UX7 667 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 NPAS4Q8IUM7 802 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 PPM1EQ8WY54 764 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 ZNF689Q96CS4 500 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-206ENST00000536429 JPH2Q9BR39 696 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-206ENST00000536429 POLR3CQ9BUI4 534 aaPredicted RBP14.69□□□□□ -0.06
PRKDC-206ENST00000536429 TUFT1Q9NNX1 390 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 ANKEF1Q9NU02 776 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 COL4A3BPQ9Y5P4 624 aa14.69□□□□□ -0.06
PRKDC-206ENST00000536429 ADGRA3Q8IWK6 1321 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 TTC3P53804 2025 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 DENND3A2RUS2 1198 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 VPS37CA5D8V6 355 aaPredicted RBP14.68□□□□□ -0.06
PRKDC-206ENST00000536429 C9IYK1 514 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 CDC25AP30304 524 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 SARSP49591 514 aaKnown RBP14.68□□□□□ -0.06
PRKDC-206ENST00000536429 LAMTOR4Q0VGL1 99 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 CCDC85BQ15834 202 aaPredicted RBP14.68□□□□□ -0.06
PRKDC-206ENST00000536429 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 ZNF410Q86VK4 478 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 IGSF22Q8N9C0 903 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 ASAP3Q8TDY4 903 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 MTRQ99707 1265 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 GCOM2Q9BZD3 368 aaPredicted RBP14.68□□□□□ -0.06
PRKDC-206ENST00000536429 MINDY3Q9H8M7 445 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 IFT122Q9HBG6 1241 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 PRDM6Q9NQX0 595 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 PPME1Q9Y570 386 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 MTCH2Q9Y6C9 303 aa14.68□□□□□ -0.06
PRKDC-206ENST00000536429 LOXHD1Q8IVV2 1947 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 USO1O60763 962 aaKnown RBP14.67□□□□□ -0.06
PRKDC-206ENST00000536429 SRGAP2CP0DJJ0 459 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 RPA1P27694 616 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 FAM189BP81408 668 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 ATP2C1P98194 919 aaPredicted RBP14.67□□□□□ -0.06
PRKDC-206ENST00000536429 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
PRKDC-206ENST00000536429 EPC2Q52LR7 807 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 FAM102BQ5T8I3 360 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 SLC24A5Q71RS6 500 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 ZNF710Q8N1W2 664 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 MICALL1Q8N3F8 863 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 PSPC1Q8WXF1 523 aaKnown RBP14.67□□□□□ -0.06
PRKDC-206ENST00000536429 SNX21Q969T3 373 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 ATP6V0A4Q9HBG4 840 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 GPRC5CQ9NQ84 441 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 HCSTQ9UBK5 93 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 LRWD1Q9UFC0 647 aa14.67□□□□□ -0.06
PRKDC-206ENST00000536429 MRPL42Q9Y6G3 142 aaKnown RBP14.67□□□□□ -0.06
PRKDC-206ENST00000536429 PRRC2BQ5JSZ5 2229 aaKnown RBP14.66□□□□□ -0.06
PRKDC-206ENST00000536429 FGFR1P11362 822 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 SYT1P21579 422 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 ARL2P36404 184 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 CCT6AP40227 531 aaKnown RBP14.66□□□□□ -0.06
PRKDC-206ENST00000536429 BTG3Q14201 252 aaPredicted RBP14.66□□□□□ -0.06
PRKDC-206ENST00000536429 ODR4Q5SWX8 454 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 MAEAQ7L5Y9 396 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 TMEM192Q8IY95 271 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 FIBCD1Q8N539 461 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 FBXO22Q8NEZ5 403 aa14.66□□□□□ -0.06
PRKDC-206ENST00000536429 ERMNQ8TAM6 284 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms