RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 VPS13AQ96RL7 3174 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 PLXNA3P51805 1871 aa9.12□□□□□ -0.95
CHFR-211ENST00000535897 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.11□□□□□ -0.95
CHFR-211ENST00000535897 C2orf71A6NGG8 1288 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 ZBTB42B2RXF5 422 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 FAM86B1E9PN63 330 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 hCG_1984214I3L0E3 225 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 SLC27A2O14975 620 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 GPR32O75388 356 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 PSAPP07602 524 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 FAM86B2P0C5J1 330 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 MTHFRP42898 656 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 ALDH7A1P49419 539 aaKnown RBP9.11□□□□□ -0.95
CHFR-211ENST00000535897 FAM189BP81408 668 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 FOXK2Q01167 660 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 COL9A3Q14050 684 aaPredicted RBP9.11□□□□□ -0.95
CHFR-211ENST00000535897 DSC3Q14574 896 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 RTN1Q16799 776 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 JAKMIP3Q5VZ66 844 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 EFCAB12Q6NXP0 572 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 NIPA1Q7RTP0 329 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 ECHDC2Q86YB7 292 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 LRRC71Q8N4P6 559 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 ZNF713Q8N859 430 aaPredicted RBP9.11□□□□□ -0.95
CHFR-211ENST00000535897 MRPL43Q8N983 215 aaKnown RBP9.11□□□□□ -0.95
CHFR-211ENST00000535897 FLCNQ8NFG4 579 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 HELQQ8TDG4 1101 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 TMEM169Q96HH4 297 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 MRPL9Q9BYD2 267 aaKnown RBP9.11□□□□□ -0.95
CHFR-211ENST00000535897 GLT8D2Q9H1C3 349 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 TBC1D22BQ9NU19 505 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 GABBR1Q9UBS5 961 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 MYO10Q9HD67 2058 aa9.11□□□□□ -0.95
CHFR-211ENST00000535897 FAM186AA6NE01 2351 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 GVINP1Q7Z2Y8 2422 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 ZNF292O60281 2723 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 PRR23AA6NEV1 266 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 NT5C1B-RDH14C9J2C7 533 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 PROB1E7EW31 1015 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 MAGEB2O15479 319 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 ZBTB43O43298 467 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 CLASP2O75122 1294 aaKnown RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 ZC3H11AO75152 810 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHFR-211ENST00000535897 CXCL14O95715 111 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 ATP4AP20648 1035 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 EIF4BP23588 611 aaKnown RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 BCAR1P56945 870 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 SETQ01105 290 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 CLLU1OSQ5K130 101 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 ATAT1Q5SQI0 421 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 CREB3L3Q68CJ9 461 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 MCTP2Q6DN12 878 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 ASTLQ6HA08 431 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 ZNF746Q6NUN9 644 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 APOA5Q6Q788 366 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 FRMD5Q7Z6J6 570 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 SGMS1Q86VZ5 419 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 TEX2Q8IWB9 1127 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 SMAP1Q8IYB5 467 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 VPS52Q8N1B4 723 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 SLC39A11Q8N1S5 342 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 C12orf76Q8N812 135 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 NLRP7Q8WX94 980 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 NKD2Q969F2 451 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 FAM167AQ96KS9 214 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 ANO2Q9NQ90 1003 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 RNF19AQ9NV58 838 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 DZANK1Q9NVP4 752 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 BARHL2Q9NY43 387 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 LIMD1Q9UGP4 676 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 PCDHA10Q9Y5I2 948 aa9.1□□□□□ -0.95
CHFR-211ENST00000535897 MAFBQ9Y5Q3 323 aaPredicted RBP9.1□□□□□ -0.95
CHFR-211ENST00000535897 IGLV3-22A0A075B6J6 115 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 GOLGA8AA7E2F4 631 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 GOLGA8BA8MQT2 603 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 DHX15O43143 795 aaKnown RBP9.09□□□□□ -0.95
CHFR-211ENST00000535897 FGFR4P22455 802 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 NBL1P41271 181 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 FGD1P98174 961 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 LONRF3Q496Y0 759 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 PRR16Q569H4 304 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 RNF20Q5VTR2 975 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 KANK3Q6NY19 840 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 TMC5Q6UXY8 1006 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 CABP7Q86V35 215 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 PLCD3Q8N3E9 789 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 AUTS2Q8WXX7 1259 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 ACSF2Q96CM8 615 aaPredicted RBP9.09□□□□□ -0.95
CHFR-211ENST00000535897 TCEANC2Q96MN5 208 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 LSG1Q9H089 658 aaKnown RBP9.09□□□□□ -0.95
CHFR-211ENST00000535897 NRBP2Q9NSY0 501 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 DACT1Q9NYF0 836 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 FBXL21Q9UKT6 434 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
CHFR-211ENST00000535897 A0A0U1RQF3 1178 aa9.08□□□□□ -0.96
CHFR-211ENST00000535897 KLF18A0A0U1RQI7 1052 aa9.08□□□□□ -0.96
CHFR-211ENST00000535897 WDR64B1ANS9 1081 aa9.08□□□□□ -0.96
CHFR-211ENST00000535897 CHMP2AO43633 222 aa9.08□□□□□ -0.96
CHFR-211ENST00000535897 CSDE1O75534 798 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms