RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 TMX1Q9H3N1 280 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 UNC45AQ9H3U1 944 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
CCDC60-202ENST00000535685 C1orf112Q9NSG2 853 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 MTUS1Q9ULD2 1270 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 SAMM50Q9Y512 469 aa12.17□□□□□ -0.46
CCDC60-202ENST00000535685 TNFRSF10AO00220 468 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 TBX3O15119 743 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 RPS6KA5O75582 802 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 STBD1O95210 358 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 TMOD1P28289 359 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 SARSP49591 514 aaKnown RBP12.16□□□□□ -0.46
CCDC60-202ENST00000535685 FAM189BP81408 668 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 PRKCEQ02156 737 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 TMEM62Q0P6H9 643 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 GPM6BQ13491 265 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 XKR3Q5GH77 459 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 NEK8Q86SG6 692 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 ADAMTS19Q8TE59 1207 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 P2RX5Q93086 422 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 UIMC1Q96RL1 719 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 C11orf84Q9BUA3 381 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-202ENST00000535685 ADAMTS10Q9H324 1103 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 KCNMB3Q9NPA1 279 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 RGS18Q9NS28 235 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 ORC3Q9UBD5 711 aaPredicted RBP12.16□□□□□ -0.46
CCDC60-202ENST00000535685 KCNJ14Q9UNX9 436 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 NOC2LQ9Y3T9 749 aaKnown RBP12.16□□□□□ -0.46
CCDC60-202ENST00000535685 XIRP2A4UGR9 3374 aa12.16□□□□□ -0.46
CCDC60-202ENST00000535685 IGKV6-21A0A0C4DH24 114 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 CCDC194A0A1B0GVG4 234 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 C9IYK1 514 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 CENPBP07199 599 aaPredicted RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 FDPSP14324 419 aaKnown RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 TFF2Q03403 129 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 PPP2R5CQ13362 524 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 BTG3Q14201 252 aaPredicted RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 DSC3Q14574 896 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 UGCGQ16739 394 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 INF2Q27J81 1249 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 TSR1Q2NL82 804 aaKnown RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 EFCAB12Q6NXP0 572 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 SLC24A5Q71RS6 500 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 MIER3Q7Z3K6 550 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 GTF3C6Q969F1 213 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 MAP7D2Q96T17 732 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 ELAC1Q9H777 363 aaKnown RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 DDX25Q9UHL0 483 aaKnown RBP12.15□□□□□ -0.46
CCDC60-202ENST00000535685 ST3GAL5Q9UNP4 418 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 PPME1Q9Y570 386 aa12.15□□□□□ -0.46
CCDC60-202ENST00000535685 NCK2O43639 380 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 MGEA5O60502 916 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 EIF4BP23588 611 aaKnown RBP12.14□□□□□ -0.47
CCDC60-202ENST00000535685 CTNNB1P35222 781 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
CCDC60-202ENST00000535685 ME3Q16798 604 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 KIZQ2M2Z5 673 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 FAM228AQ86W67 206 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 METTL13Q8N6R0 699 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 TNFRSF25Q93038 417 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 UHRF1Q96T88 793 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-202ENST00000535685 UBE2ZQ9H832 354 aaPredicted RBP12.14□□□□□ -0.47
CCDC60-202ENST00000535685 VAV3Q9UKW4 847 aa12.14□□□□□ -0.47
CCDC60-202ENST00000535685 PLXNA4Q9HCM2 1894 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 CHMP2AO43633 222 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 SLC37A4O43826 429 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 DKC1O60832 514 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC60-202ENST00000535685 MMP1P03956 469 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 VTNP04004 478 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 GPC3P51654 580 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 KCNQ1P51787 676 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 CLCN3P51790 818 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 NEK4P51957 841 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 NLRP11P59045 1033 aaKnown RBP12.13□□□□□ -0.47
CCDC60-202ENST00000535685 PSMC5P62195 406 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 TBC1D8BQ0IIM8 1120 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 TMEM266Q2M3C6 531 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 BANK1Q8NDB2 785 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
CCDC60-202ENST00000535685 HAS1Q92839 578 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 GJA10Q969M2 543 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 OSMRQ99650 979 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 ADAM2Q99965 735 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 NSUN3Q9H649 340 aaKnown RBP12.13□□□□□ -0.47
CCDC60-202ENST00000535685 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 MRPL42Q9Y6G3 142 aaKnown RBP12.13□□□□□ -0.47
CCDC60-202ENST00000535685 ARID2Q68CP9 1835 aa12.13□□□□□ -0.47
CCDC60-202ENST00000535685 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 EML1O00423 815 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 MAFO75444 373 aaPredicted RBP12.12□□□□□ -0.47
CCDC60-202ENST00000535685 LARGE1O95461 756 aa12.12□□□□□ -0.47
CCDC60-202ENST00000535685 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
CCDC60-202ENST00000535685 DARSP14868 501 aaKnown RBP12.12□□□□□ -0.47
CCDC60-202ENST00000535685 QARSP47897 775 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms