RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 FIZ1Q96SL8 496 aa25.29■■□□□ 1.64
RBFOX1-206ENST00000535565 ZBTB42B2RXF5 422 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 PMS1P54277 932 aaKnown RBP25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 GJA9P57773 515 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 ANKRD40Q6AI12 368 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 FOXR2Q6PJQ5 311 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 NELFCDQ8IXH7 590 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 ZNF507Q8TCN5 953 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 TCP11Q8WWU5 503 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 HSD3B7Q9H2F3 369 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 SEMA6BQ9H3T3 888 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 WBP1LQ9NX94 342 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 TRIM17Q9Y577 477 aa25.28■■□□□ 1.64
RBFOX1-206ENST00000535565 F2P00734 622 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 C6orf222P0C671 652 aaPredicted RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 MAP3K21Q5TCX8 1036 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 SARM1Q6SZW1 724 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 NOC3LQ8WTT2 800 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 UPF3AQ9H1J1 476 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 KPNA6O60684 536 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 PRPF6O94906 941 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 MYL3P08590 195 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 INSRRP14616 1297 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 CDK11BP21127 795 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 CCND3P30281 292 aaPredicted RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 DEKP35659 375 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 SOX10P56693 466 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 PPP2R5AQ15172 486 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 KNOP1Q1ED39 458 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 CSGALNACT2Q8N6G5 542 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 SPIRE2Q8WWL2 714 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 TMEM143Q96AN5 459 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 KATNAL1Q9BW62 490 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 ST6GALNAC4Q9H4F1 302 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 KMT5AQ9NQR1 393 aa25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 SAMSN1Q9NSI8 373 aaKnown RBP25.27■■□□□ 1.64
RBFOX1-206ENST00000535565 CCDC169A6NNP5 214 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 FGFR1OPO95684 399 aaKnown RBP25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 ZNF18P17022 549 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 NCKAP1LP55160 1127 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 BEX3Q00994 111 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 PPP4R3CPQ6ZMV5 832 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 RETREG2Q8NC44 543 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 KCTD10Q9H3F6 313 aa25.26■■□□□ 1.63
RBFOX1-206ENST00000535565 PCNTO95613 3336 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 H0YCG3 227 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 MAGEB2O15479 319 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 ZEB2O60315 1214 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 GRK4P32298 578 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 ABCD1P33897 745 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 ARL2P36404 184 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 NPTX2P47972 431 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 PPFIA1Q13136 1202 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 ZC2HC1CQ53FD0 456 aaPredicted RBP25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 IER5Q5VY09 327 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 HAUS6Q7Z4H7 955 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 DUSP9Q99956 384 aaKnown RBP25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 NTPCRQ9BSD7 190 aaKnown RBP25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 TRIM5Q9C035 493 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 THAP9Q9H5L6 903 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 XPNPEP3Q9NQH7 507 aa25.25■■□□□ 1.63
RBFOX1-206ENST00000535565 IGKV6-21A0A0C4DH24 114 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 SLC16A4O15374 487 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 PPP1R37O75864 691 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 SCP2P22307 547 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 DNM2P50570 870 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 IGBP1P78318 339 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 MFSD10Q14728 455 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 KIAA0753Q2KHM9 967 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 ZCWPW2Q504Y3 356 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 GNASQ5JWF2 1037 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 CDKAL1Q5VV42 579 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 TRAPPC12Q8WVT3 735 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 BSNDQ8WZ55 320 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 STRA6Q9BX79 667 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 SRRTQ9BXP5 876 aaKnown RBP25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 SUGCTQ9HAC7 445 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 EVPLQ92817 2033 aa25.24■■□□□ 1.63
RBFOX1-206ENST00000535565 CALUO43852 315 aaPredicted RBP25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 ADCY5O95622 1261 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 SERPINC1P01008 464 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 INHAP05111 366 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 ATP1A3P13637 1013 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 NKX3-2P78367 333 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 SPAG1Q07617 926 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 HSP90AA4PQ58FG1 418 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 FAM114A1Q8IWE2 563 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 ANKRD20A12PQ8NF67 263 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 PSPC1Q8WXF1 523 aaKnown RBP25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 HVCN1Q96D96 273 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 TMEM206Q9H813 350 aa25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 TYW1Q9NV66 732 aaKnown RBP25.23■■□□□ 1.63
RBFOX1-206ENST00000535565 RRN3P2A6NIE6 340 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 PDXKO00764 312 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 AP5Z1O43299 807 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 C22orf31O95567 290 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 NAMPTP43490 491 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 PSEN2P49810 448 aa25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 IRX5P78411 483 aaPredicted RBP25.22■■□□□ 1.63
RBFOX1-206ENST00000535565 GTF2BQ00403 316 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms