RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 ZDHHC14Q8IZN3 488 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 TLCD1Q96CP7 247 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ERP44Q9BS26 406 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 FAM129AQ9BZQ8 928 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 SLITRK6Q9H5Y7 841 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 VEZTQ9HBM0 779 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 NOD2Q9HC29 1040 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 CD209Q9NNX6 404 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ACP6Q9NPH0 428 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ZDHHC18Q9NUE0 388 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 GGA2Q9UJY4 613 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 PCDHA1Q9Y5I3 950 aa14.53□□□□□ -0.08
HDAC4-214ENST00000535493 ASTN1O14525 1302 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 BHMG1C9JSJ3 638 aaPredicted RBP14.52□□□□□ -0.08
HDAC4-214ENST00000535493 ANKRD63C9JTQ0 380 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 ATMINO43313 823 aaPredicted RBP14.52□□□□□ -0.08
HDAC4-214ENST00000535493 PPIP5K2O43314 1243 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 GPSM2P81274 684 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 EDRF1Q3B7T1 1238 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 CBWD6Q4V339 395 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 CBWD3Q5JTY5 395 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 CBWD5Q5RIA9 395 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 VPS36Q86VN1 386 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 KIF2BQ8N4N8 673 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 PRCCQ92733 491 aaPredicted RBP14.52□□□□□ -0.08
HDAC4-214ENST00000535493 CEP83Q9Y592 693 aa14.52□□□□□ -0.08
HDAC4-214ENST00000535493 BTNL10A8MVZ5 291 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 CES2O00748 559 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 RGS16O15492 202 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-214ENST00000535493 PPFIA2O75334 1257 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 ATP6V1G2O95670 118 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 SPATA31C1P0DKV0 1188 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 STAT1P42224 750 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 CYP2J2P51589 502 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 JAM2P57087 298 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 KCNJ2P63252 427 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 MYO1EQ12965 1108 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 XRCC4Q13426 336 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 DRP2Q13474 957 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 DENND2CQ68D51 928 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 ARHGAP27Q6ZUM4 889 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 ZNF804AQ7Z570 1209 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 FRMD5Q7Z6J6 570 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 JAMLQ86YT9 394 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 OLIG1Q8TAK6 271 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 LMBR1Q8WVP7 490 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 ATXN2LQ8WWM7 1075 aaKnown RBP14.52□□□□□ -0.09
HDAC4-214ENST00000535493 ELMO3Q96BJ8 720 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 FAM114A2Q9NRY5 505 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 INTS9Q9NV88 658 aaKnown RBP14.52□□□□□ -0.09
HDAC4-214ENST00000535493 BZW2Q9Y6E2 419 aaKnown RBP14.52□□□□□ -0.09
HDAC4-214ENST00000535493 ROBO1Q9Y6N7 1651 aa14.52□□□□□ -0.09
HDAC4-214ENST00000535493 A8MUI8 341 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 CHMP2AO43633 222 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 PAEPP09466 180 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 EZRP15311 586 aaKnown RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 HOXA13P31271 388 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 CLNS1AP54105 237 aaKnown RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 KLRC3Q07444 240 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 NAA25Q14CX7 972 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 C10orf76Q5T2E6 689 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 DUPD1Q68J44 220 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 ZDHHC24Q6UX98 284 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 NEK9Q8TD19 979 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 SLC20A1Q8WUM9 679 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 CTNNBL1Q8WYA6 563 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.51□□□□□ -0.091e-6■■■■■ 55.5
HDAC4-214ENST00000535493 DONSONQ9NYP3 566 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 DNAJC12Q9UKB3 198 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 DNM3Q9UQ16 869 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 KDM3AQ9Y4C1 1321 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 UBAP1LF5GYI3 381 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 GBP2P32456 591 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 RPL21P46778 160 aaKnown RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 PSEN1P49768 467 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 ORC2Q13416 577 aaPredicted RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 SEPT2Q15019 361 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 QRICH1Q2TAL8 776 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 ASPRV1Q53RT3 343 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 KIAA1755Q5JYT7 1200 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 TRMT1LQ7Z2T5 733 aaKnown RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 PABPC3Q9H361 631 aaKnown RBP14.51□□□□□ -0.09
HDAC4-214ENST00000535493 SLC24A3Q9HC58 644 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 RPTORQ8N122 1335 aa14.51□□□□□ -0.09
HDAC4-214ENST00000535493 FAM86B1E9PN63 330 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 RIMBP2O15034 1052 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 ZBTB5O15062 677 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 FAM86B2P0C5J1 330 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 PRKCIP41743 596 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 SCNN1DP51172 638 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 PTENP60484 403 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 CTTNQ14247 550 aaKnown RBP14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TTC27Q6P3X3 843 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 SEC14L1Q92503 715 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 MIEF2Q96C03 454 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 ANO3Q9BYT9 981 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 TXLNGYQ9BZA5 131 aa14.5□□□□□ -0.09
HDAC4-214ENST00000535493 NYXQ9GZU5 481 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms