RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 TARBP2Q15633 366 aaKnown RBP10.58□□□□□ -0.71
CDCA3-204ENST00000535406 PLA2G4FQ68DD2 849 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.71
CDCA3-204ENST00000535406 FAM228AQ86W67 206 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 NPAS4Q8IUM7 802 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 FIBCD1Q8N539 461 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 IL27Q8NEV9 243 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 SAMD11Q96NU1 681 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 SH2D3AQ9BRG2 576 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 LXNQ9BS40 222 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 FOXP1Q9H334 677 aaPredicted RBP10.58□□□□□ -0.71
CDCA3-204ENST00000535406 TMX1Q9H3N1 280 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 RC3H2Q9HBD1 1191 aaKnown RBP10.58□□□□□ -0.71
CDCA3-204ENST00000535406 ST3GAL5Q9UNP4 418 aa10.58□□□□□ -0.71
CDCA3-204ENST00000535406 REV3LO60673 3130 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 VCANP13611 3396 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 MGEA5O60502 916 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 LPXNO60711 386 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 ATP2B1P20020 1258 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 IBSPP21815 317 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 DNM2P50570 870 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 GPC3P51654 580 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 CYP4A11Q02928 519 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 BTG3Q14201 252 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 SKIV2LQ15477 1246 aaKnown RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 EPC2Q52LR7 807 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 ANO5Q75V66 913 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 FBXO18Q8NFZ0 1043 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 NLRP7Q8WX94 980 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 SLC7A3Q8WY07 619 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 ZNF668Q96K58 619 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 TBC1D32Q96NH3 1257 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 CEP89Q96ST8 783 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 JPH2Q9BR39 696 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 ADAMTS10Q9H324 1103 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 TTC12Q9H892 705 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 PRDM6Q9NQX0 595 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 CYP26B1Q9NR63 512 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 C1orf112Q9NSG2 853 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 WRAP73Q9P2S5 460 aaPredicted RBP10.58□□□□□ -0.72
CDCA3-204ENST00000535406 THEGQ9P2T0 379 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 LRFN2Q9ULH4 789 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 PCDHA12Q9UN75 941 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 RWDD3Q9Y3V2 267 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
CDCA3-204ENST00000535406 ARID2Q68CP9 1835 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 IGKV6-21A0A0C4DH24 114 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 MAFO75444 373 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 DGKIO75912 1065 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 EIF4BP23588 611 aaKnown RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 YWHABP31946 246 aaKnown RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 MCM7P33993 719 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 CTNNB1P35222 781 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 TXKP42681 527 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 POLGP54098 1239 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 CDC42EP1Q00587 391 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 DRP2Q13474 957 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 CTTNQ14247 550 aaKnown RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 NOSTRINQ8IVI9 506 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 TPH2Q8IWU9 490 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 C4orf19Q8IY42 314 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 TMEM192Q8IY95 271 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 CMTR2Q8IYT2 770 aaKnown RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 NEK9Q8TD19 979 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 ZNF689Q96CS4 500 aaPredicted RBP10.57□□□□□ -0.72
CDCA3-204ENST00000535406 DYDC2Q96IM9 177 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 CEP170P1Q96L14 293 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 ADAM2Q99965 735 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 ZSWIM4Q9H7M6 989 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 RGS18Q9NS28 235 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 RGL1Q9NZL6 768 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 LMCD1Q9NZU5 365 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 PPME1Q9Y570 386 aa10.57□□□□□ -0.72
CDCA3-204ENST00000535406 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 POTEMA6NI47 508 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 CD2BP2O95400 341 aaKnown RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 DARSP14868 501 aaKnown RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 RFC5P40937 340 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 MCM2P49736 904 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 NPEPPSP55786 919 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 PTPROQ16827 1216 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 PAN2Q504Q3 1202 aaKnown RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 SLC24A5Q71RS6 500 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 ZNF410Q86VK4 478 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 RHPN2Q8IUC4 686 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 EXOC8Q8IYI6 725 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 CRIPAKQ8N1N5 446 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 TMX3Q96JJ7 454 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 CCDC43Q96MW1 224 aaKnown RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 MTMR9Q96QG7 549 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 EIF2AK1Q9BQI3 630 aaKnown RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 GCOM2Q9BZD3 368 aaPredicted RBP10.56□□□□□ -0.72
CDCA3-204ENST00000535406 TMEM60Q9H2L4 133 aa10.56□□□□□ -0.72
CDCA3-204ENST00000535406 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms