RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 STAMQ92783 540 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 DNAJC19Q96DA6 116 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 RUSC1Q9BVN2 902 aa13.61□□□□□ -0.23
SCARB1-204ENST00000535005 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 MAGEB2O15479 319 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 SMIM10L2AP0DMW4 78 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 SMIM10L2BP0DMW5 78 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 PPFIA1Q13136 1202 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 CUL4BQ13620 913 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 ANO6Q4KMQ2 910 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 TRMT1LQ7Z2T5 733 aaKnown RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 DDX12PQ92771 950 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 GLT1D1Q96MS3 346 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 JPH2Q9BR39 696 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 SEZ6LQ9BYH1 1024 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 PVALEFA0A1B0GWK0 134 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 GAS2O43903 313 aaKnown RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 TFRCP02786 760 aaKnown RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 SARSP49591 514 aaKnown RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 ADAM17P78536 824 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 PTPN11Q06124 597 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 GIT2Q14161 759 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 GRIK4Q16099 956 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 CAMK4Q16566 473 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 NBPF20Q3BBV1 942 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 MARCH8Q5T0T0 291 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 NT5DC1Q5TFE4 455 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 LUZP1Q86V48 1076 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 MCPH1Q8NEM0 835 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
SCARB1-204ENST00000535005 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 XPNPEP1Q9NQW7 623 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 ODF2LQ9ULJ1 636 aa13.6□□□□□ -0.23
SCARB1-204ENST00000535005 GRIN2DO15399 1336 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 A0A1W2PQ45 241 aaPredicted RBP13.59□□□□□ -0.23
SCARB1-204ENST00000535005 A0A1W2PQY0 241 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 MBLAC1A4D2B0 266 aaPredicted RBP13.59□□□□□ -0.23
SCARB1-204ENST00000535005 USO1O60763 962 aaKnown RBP13.59□□□□□ -0.23
SCARB1-204ENST00000535005 SMC2O95347 1197 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 C22orf31O95567 290 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 KCNJ6P48051 423 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
SCARB1-204ENST00000535005 TBC1D8BQ0IIM8 1120 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 PNOCQ13519 176 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 NYAP1Q6ZVC0 841 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 SLC43A3Q8NBI5 491 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 SLC7A3Q8WY07 619 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 TMEM106CQ9BVX2 250 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 BLZF1Q9H2G9 400 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 ATP6V0A4Q9HBG4 840 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 TUBE1Q9UJT0 475 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
SCARB1-204ENST00000535005 FRMD3A2A2Y4 597 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 KLRC4O43908 158 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
SCARB1-204ENST00000535005 GNAT1P11488 350 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 KLRC1P26715 233 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 CASP1P29466 404 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 ZNF165P49910 485 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 ZNF131P52739 623 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 POLGP54098 1239 aaPredicted RBP13.58□□□□□ -0.24
SCARB1-204ENST00000535005 GSDMDP57764 484 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 MAPK7Q13164 816 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 ITGA7Q13683 1181 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 EMC2Q15006 297 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 MTHFD1LQ6UB35 978 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 UNC13DQ70J99 1090 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 DAW1Q8N136 415 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 LINC01465Q8N7H1 131 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 LMBR1Q8WVP7 490 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 GSDMAQ96QA5 445 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 REEP2Q9BRK0 252 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 SETD4Q9NVD3 440 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 GTF2IRD1Q9UHL9 959 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 ARID2Q68CP9 1835 aa13.58□□□□□ -0.24
SCARB1-204ENST00000535005 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 C17orf102A2RUQ5 167 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 GOLGA6L19H0YKK7 550 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 RTP1P59025 263 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 ASIC1P78348 528 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 KCNB1Q14721 858 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 TERF2Q15554 542 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 DYMQ7RTS9 669 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 RETREG2Q8NC44 543 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 KIFAP3Q92845 792 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 SMARCE1Q969G3 411 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 DRC1Q96MC2 740 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 PCDHA2Q9Y5H9 948 aa13.57□□□□□ -0.24
SCARB1-204ENST00000535005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.57□□□□□ -0.24
SCARB1-204ENST00000535005 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
SCARB1-204ENST00000535005 HIP1RO75146 1068 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms