RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 CATSPER3Q86XQ3 398 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 KSR1Q8IVT5 923 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 REPS2Q8NFH8 660 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 DNAJC19Q96DA6 116 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RNPC3Q96LT9 517 aaKnown RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 WDR11Q9BZH6 1224 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 MMADHCQ9H3L0 296 aaPredicted RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 SEMA6BQ9H3T3 888 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 PKD2L1Q9P0L9 805 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RSPH10B2B2RC85 870 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RSPH10BP0C881 870 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 LMNB1P20700 586 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 SREBF1P36956 1147 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 TMEM119Q4V9L6 283 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RASIP1Q5U651 963 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 CDKAL1Q5VV42 579 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 RPAP3Q9H6T3 665 aaPredicted RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 A1CFQ9NQ94 594 aaKnown RBP9.82□□□□□ -0.84
SF3B2-216ENST00000534765 LRWD1Q9UFC0 647 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 TFR2Q9UP52 801 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 SAR1BQ9Y6B6 198 aa9.82□□□□□ -0.84
SF3B2-216ENST00000534765 TLDC2A0PJX2 215 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 IKBKBO14920 756 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 N4BP3O15049 544 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 CETN3O15182 167 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 VIMP08670 466 aaKnown RBP9.81□□□□□ -0.84
SF3B2-216ENST00000534765 HOXD13P35453 343 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 KCNA1Q09470 495 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 IFFO1Q0D2I5 559 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
SF3B2-216ENST00000534765 ACTR5Q9H9F9 607 aaPredicted RBP9.81□□□□□ -0.84
SF3B2-216ENST00000534765 SPON1Q9HCB6 807 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 LMCD1Q9NZU5 365 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 TBC1D7Q9P0N9 293 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 ZHX2Q9Y6X8 837 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 CYP3A7-CYP3A51PA0A087WV96 503 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 SORBS3O60504 671 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 CYP3A7P24462 503 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 C9orf131Q5VYM1 1079 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 FAM47EQ6ZV65 393 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 GPC2Q8N158 579 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 WHAMMQ8TF30 809 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 HOOK2Q96ED9 719 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 MMS19Q96T76 1030 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 PHACTR1Q9C0D0 580 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 ARHGEF10LQ9HCE6 1279 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 ZNHIT6Q9NWK9 470 aaKnown RBP9.81□□□□□ -0.84
SF3B2-216ENST00000534765 TRIM10Q9UDY6 481 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 SNCAIPQ9Y6H5 919 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 A0A1B0GVG6 124 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 ATP9AO75110 1047 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 RPS12P25398 132 aaKnown RBP9.81□□□□□ -0.84
SF3B2-216ENST00000534765 DEUP1Q05D60 604 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 EHHADHQ08426 723 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 VGLL4Q14135 290 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 TMEM63BQ5T3F8 832 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 MSANTD4Q8NCY6 345 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
SF3B2-216ENST00000534765 H0Y3Z8 333 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 GTPBP6O43824 516 aaPredicted RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ASNSP08243 561 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 CXCR5P32302 372 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 UBA7P41226 1012 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 VAV2P52735 878 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 LACTBP83111 547 aaPredicted RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ZRSR2Q15696 482 aaKnown RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ANKRD40Q6AI12 368 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 TAAR1Q96RJ0 339 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 EPAS1Q99814 870 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ESYT3A0FGR9 886 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 CCDC160A6NGH7 325 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 RGS20O76081 388 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 USP14P54578 494 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ITGB3BPQ13352 177 aaPredicted RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 CCDC6Q16204 474 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 GKAP1Q5VSY0 366 aaPredicted RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ADSSL1Q8N142 457 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.8□□□□□ -0.848e-11■□□□□ 9.2
SF3B2-216ENST00000534765 JAKMIP2Q96AA8 810 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 SLC38A10Q9HBR0 1119 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 KIAA1024Q9UPX6 916 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ZNF185O15231 689 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 PPP1R37O75864 691 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 CASP14P31944 242 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 TUBB4BP68371 445 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 RBL2Q08999 1139 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 NR1I3Q14994 352 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ANKS4BQ8N8V4 417 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 FAM81AQ8TBF8 368 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 ENOX1Q8TC92 643 aaKnown RBP9.8□□□□□ -0.84
SF3B2-216ENST00000534765 PIGOQ8TEQ8 1089 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 GSDMAQ96QA5 445 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 TANGO6Q9C0B7 1094 aa9.8□□□□□ -0.84
SF3B2-216ENST00000534765 KIAA1683Q9H0B3 1180 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms