RNA–Protein interactions for RNA: ENST00000534556.1

USH1C-210, Transcript of USH1 protein network component harmonin, humanhuman

TSL 3

Gene USH1C, Length 244 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-210ENST00000534556 DARSP14868 501 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 XBP1P17861 261 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 CDC25AP30304 524 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 AFF1P51825 1210 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 PSMC5P62195 406 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 HMGN5P82970 282 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 GRIN1Q05586 938 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 NFX1Q12986 1120 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 EPC2Q52LR7 807 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 TTC38Q5R3I4 469 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 IER5Q5VY09 327 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 LRRC55Q6ZSA7 311 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 KCNK18Q7Z418 384 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 CATSPER3Q86XQ3 398 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 NOSTRINQ8IVI9 506 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 TPH2Q8IWU9 490 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 C4orf19Q8IY42 314 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 NME8Q8N427 588 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 PRPF31Q8WWY3 499 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 PPM1EQ8WY54 764 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 APBB2Q92870 758 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 TMEM143Q96AN5 459 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 FAM167AQ96KS9 214 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 ADAM2Q99965 735 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 FDXACB1Q9BRP7 624 aaPredicted RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 ZBED2Q9BTP6 218 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 MMTAG2Q9BU76 263 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 FOXP1Q9H334 677 aaPredicted RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 CYP26B1Q9NR63 512 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 RGS18Q9NS28 235 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 NRBP2Q9NSY0 501 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 PCDHA12Q9UN75 941 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 AKT3Q9Y243 479 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 USP20Q9Y2K6 914 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 PCDHGC5Q9Y5F6 944 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 MRPL42Q9Y6G3 142 aaKnown RBP5.68□□□□□ -1.5
USH1C-210ENST00000534556 SQORQ9Y6N5 450 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 DENND4AQ7Z401 1863 aa5.68□□□□□ -1.5
USH1C-210ENST00000534556 NOTCH4Q99466 2003 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 DOCK8Q8NF50 2099 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 GRM6O15303 877 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 MAGEB2O15479 319 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 EFCAB14O75071 495 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 RPS6KA5O75582 802 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 LYPLA2O95372 231 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 AMHP03971 560 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 OR52Z1P0C646 297 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 FGFR1P11362 822 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 IBSPP21815 317 aaPredicted RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 IGFBP4P22692 258 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 EIF4BP23588 611 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 HOXA11P31270 313 aaPredicted RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 YWHABP31946 246 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 GTF2F1P35269 517 aaKnown RBP eCLIP5.67□□□□□ -1.5
USH1C-210ENST00000534556 TECP42680 631 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 SARSP49591 514 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 RARRES1P49788 294 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 TFF2Q03403 129 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 TBC1D8BQ0IIM8 1120 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 PAK2Q13177 524 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 PTGDRQ13258 359 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 AMHR2Q16671 573 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 PAN2Q504Q3 1202 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 XKR9Q5GH70 373 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 CLLU1OSQ5K130 101 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 UBXN11Q5T124 520 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 FAM173BQ6P4H8 233 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 POTEGQ6S5H5 508 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 RSPH3Q86UC2 560 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 ZNF598Q86UK7 904 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 RHPN2Q8IUC4 686 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 TMEM192Q8IY95 271 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 SLC17A8Q8NDX2 589 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 ASAP3Q8TDY4 903 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 BSNDQ8WZ55 320 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 CLP1Q92989 425 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 TGS1Q96RS0 853 aaKnown RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 CXCL16Q9H2A7 254 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 CWH43Q9H720 699 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 SUCLA2Q9P2R7 463 aaPredicted RBP5.67□□□□□ -1.5
USH1C-210ENST00000534556 INSL6Q9Y581 213 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 ADGRA3Q8IWK6 1321 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 SCN1AP35498 2009 aa5.67□□□□□ -1.5
USH1C-210ENST00000534556 H3BNC9 293 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 ST18O60284 1047 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 EIF5BO60841 1220 aaKnown RBP5.66□□□□□ -1.5
USH1C-210ENST00000534556 ITGB1P05556 798 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 SRGAP2CP0DJJ0 459 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 GLRA2P23416 452 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 IRS1P35568 1242 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 ARL2P36404 184 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 PBX3P40426 434 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 LAMTOR4Q0VGL1 99 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 RESTQ13127 1097 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 MAPK7Q13164 816 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 CAPSQ13938 189 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 TRIM29Q14134 588 aa5.66□□□□□ -1.5
USH1C-210ENST00000534556 EMC2Q15006 297 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms