RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	PPP6R3	Q5H9R7	873 aa	Predicted RBP	16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	POTED	Q86YR6	584 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SEPT1	Q8WYJ6	367 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ZNF668	Q96K58	619 aa	Predicted RBP	16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SAMSN1	Q9NSI8	373 aa	Known RBP	16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PFAS	O15067	1338 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	NDUFB10	O96000	172 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	FCGRT	P55899	365 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TFDP2	Q14188	446 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TMEM270	Q6UE05	265 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KIF12	Q96FN5	646 aa		16.89	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KIAA1755	Q5JYT7	1200 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ZWILCH	Q9H900	591 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	NTSR2	O95665	410 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	STX1B	P61266	288 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RAD51	Q06609	339 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SBK1	Q52WX2	424 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	XKR3	Q5GH77	459 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ALKBH5	Q6P6C2	394 aa	Known RBP	16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TRIM42	Q8IWZ5	723 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GPT2	Q8TD30	523 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	EIF2AK1	Q9BQI3	630 aa	Known RBP	16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GINM1	Q9NU53	330 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MSH2	P43246	934 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RESP18	Q5W5W9	173 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RNF149	Q8NC42	400 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	HSPH1	Q92598	858 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	VPS39	Q96JC1	886 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532		A8MXQ7	604 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	STXBP3	O00186	592 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MAGEB2	O15479	319 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CDC25B	P30305	580 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TCP11X2	Q5H9J9	407 aa		16.88	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CASQ2	O14958	399 aa	Predicted RBP	16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	APOE	P02649	317 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RALA	P11233	206 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	APBA1	Q02410	837 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	COASY	Q13057	564 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KNOP1	Q1ED39	458 aa	Known RBP	16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	LRRC8C	Q8TDW0	803 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	UBE4B	O95155	1302 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	POTEF	A5A3E0	1075 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	POTEI	P0CG38	1075 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ATXN8OS	P0DMR3	200 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SDC4	P31431	198 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GTF2A2	P52657	109 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RWDD2B	P57060	319 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ZNF543	Q08ER8	600 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	POTEG	Q6S5H5	508 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	POTEE	Q6S8J3	1075 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	FAM217B	Q9NTX9	383 aa	Predicted RBP	16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MMEL1	Q495T6	779 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ATG9A	Q7Z3C6	839 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SAMD7	Q7Z3H4	446 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TEX2	Q8IWB9	1127 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CHST13	Q8NET6	341 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TIPIN	Q9BVW5	301 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SUCLA2	Q9P2R7	463 aa	Predicted RBP	16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GOLGA8K	D6RF30	607 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ARHGAP25	P42331	645 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CYP27A1	Q02318	531 aa		16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MMTAG2	Q9BU76	263 aa	Known RBP	16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	16.87	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PAM	P19021	973 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CA4	P22748	312 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	VAMP7	P51809	220 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	DUOXA2	Q1HG44	320 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CYFIP1	Q7L576	1253 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SGMS1	Q86VZ5	419 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TNIP3	Q96KP6	325 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MID2	Q9UJV3	735 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	IQSEC2	Q5JU85	1478 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	HMGB1P1	B2RPK0	211 aa	Predicted RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MAP3K7	O43318	606 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TGFB2	P61812	414 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TOB2	Q14106	344 aa	Predicted RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	MXD4	Q14582	209 aa	Predicted RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PRAMEF18	Q5VWM3	479 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	C9orf131	Q5VYM1	1079 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PCGF5	Q86SE9	256 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TUFT1	Q9NNX1	390 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	AGO2	Q9UKV8	859 aa	Known RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SETD1B	Q9UPS6	1966 aa	Known RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	ARHGAP42	A6NI28	874 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532		M0QYV0	167 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KIAA0391	O15091	583 aa	Known RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CSF1R	P07333	972 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	GPD1L	Q8N335	351 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	SLC35F6	Q8N357	371 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	RBAK	Q9NYW8	714 aa	Predicted RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	NR3C2	P08235	984 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	KRT39	Q6A163	491 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	DGAT1	O75907	488 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PRKCB	P05771	671 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	C11orf57	Q6ZUT1	292 aa	Predicted RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	TADA2B	Q86TJ2	420 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	PKNOX2	Q96KN3	472 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	DDX50	Q9BQ39	737 aa	Known RBP	16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	HAUS8	Q9BT25	410 aa		16.86	■□□□□ 0.29
NCAPD3-213	ENST00000534532	CDC23	Q9UJX2	597 aa		16.86	■□□□□ 0.29

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms