RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 KRTAP19-1Q8IUB9 90 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 ANKRD13AQ8IZ07 590 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 TGFBRAP1Q8WUH2 860 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 AJUBAQ96IF1 538 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 KATNBL1Q9H079 304 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 PRDM12Q9H4Q4 367 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 TRHDEQ9UKU6 1024 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 TMPRSS11EQ9UL52 423 aa8.73□□□□□ -1.01
CASP4-213ENST00000534356 A0A0A6YYJ9 748 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 ST20-MTHFSA0A0A6YYL1 179 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 CUTAO60888 179 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 OPHN1O60890 802 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 PFKMP08237 780 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 MAP3K12Q12852 859 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 EIF4HQ15056 248 aaKnown RBP8.72□□□□□ -1.01
CASP4-213ENST00000534356 FSCN1Q16658 493 aaKnown RBP8.72□□□□□ -1.01
CASP4-213ENST00000534356 PITRM1Q5JRX3 1037 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 SYDE2Q5VT97 1194 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 FERMT3Q86UX7 667 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 CBARPQ8N350 705 aaPredicted RBP8.72□□□□□ -1.01
CASP4-213ENST00000534356 KLHL36Q8N4N3 616 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 EAF2Q96CJ1 260 aaPredicted RBP8.72□□□□□ -1.01
CASP4-213ENST00000534356 MBD6Q96DN6 1003 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 LCORQ96JN0 433 aaPredicted RBP8.72□□□□□ -1.01
CASP4-213ENST00000534356 ACAP3Q96P50 834 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 MENTQ9BUN1 341 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 LUC7LQ9NQ29 371 aaKnown RBP8.72□□□□□ -1.01
CASP4-213ENST00000534356 ZDHHC9Q9Y397 364 aa8.72□□□□□ -1.01
CASP4-213ENST00000534356 C9orf118A6NHY6 69 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 NOBOXO60393 691 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 HMGCRP04035 888 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 LPLP06858 475 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 ETV4P43268 484 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 GPR3P46089 330 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 STAT5BP51692 787 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 KLF1Q13351 362 aaPredicted RBP8.71□□□□□ -1.02
CASP4-213ENST00000534356 DGKDQ16760 1214 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 BMP8AQ7Z5Y6 402 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 NOL10Q9BSC4 688 aaKnown RBP8.71□□□□□ -1.02
CASP4-213ENST00000534356 ASPSCR1Q9BZE9 553 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 GOLGA2P5Q9HBQ8 144 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 BARX1Q9HBU1 254 aaPredicted RBP8.71□□□□□ -1.02
CASP4-213ENST00000534356 ADAM29Q9UKF5 820 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 PTPN22Q9Y2R2 807 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 NUMBLQ9Y6R0 609 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 ADAMTS20P59510 1910 aa8.71□□□□□ -1.02
CASP4-213ENST00000534356 MROH6A6NGR9 719 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 GABRDO14764 452 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 ZNF888P0CJ79 500 aaPredicted RBP8.7□□□□□ -1.02
CASP4-213ENST00000534356 ENPP1P22413 925 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 CSF2RBP32927 897 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 IARSP41252 1262 aaKnown RBP8.7□□□□□ -1.02
CASP4-213ENST00000534356 TRIM25Q14258 630 aaKnown RBP8.7□□□□□ -1.02
CASP4-213ENST00000534356 UGT8Q16880 541 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 INAVAQ3KP66 663 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 NT5DC1Q5TFE4 455 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 LARP4Q71RC2 724 aaKnown RBP eCLIP8.7□□□□□ -1.02
CASP4-213ENST00000534356 GPR155Q7Z3F1 870 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 REXO1L1PQ8IX06 675 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 IFNL2Q8IZJ0 200 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
CASP4-213ENST00000534356 ORAI2Q96SN7 254 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 CARD11Q9BXL7 1154 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 HAPLN2Q9GZV7 340 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 WNT8AQ9H1J5 351 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 TYW1Q9NV66 732 aaKnown RBP8.7□□□□□ -1.02
CASP4-213ENST00000534356 SAE1Q9UBE0 346 aaPredicted RBP8.7□□□□□ -1.02
CASP4-213ENST00000534356 USP18Q9UMW8 372 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 EDARQ9UNE0 448 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 WASHC2AQ641Q2 1341 aa8.7□□□□□ -1.02
CASP4-213ENST00000534356 H2AFYO75367 372 aaKnown RBP8.69□□□□□ -1.02
CASP4-213ENST00000534356 CELA3BP08861 270 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 BMP7P18075 431 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 GJA9P57773 515 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 EXOSC10Q01780 885 aaKnown RBP8.69□□□□□ -1.02
CASP4-213ENST00000534356 TRIM68Q6AZZ1 485 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 DYDC2Q96IM9 177 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 KCTD10Q9H3F6 313 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 NCAPD3P42695 1498 aa8.69□□□□□ -1.02
CASP4-213ENST00000534356 PPM1GO15355 546 aaPredicted RBP8.68□□□□□ -1.02
CASP4-213ENST00000534356 MAFGO15525 162 aa8.68□□□□□ -1.02
CASP4-213ENST00000534356 ABCB5Q2M3G0 1257 aa8.68□□□□□ -1.02
CASP4-213ENST00000534356 SLC41A1Q8IVJ1 513 aa8.68□□□□□ -1.02
CASP4-213ENST00000534356 SP8Q8IXZ3 490 aa8.68□□□□□ -1.02
CASP4-213ENST00000534356 SMAD5Q99717 465 aaKnown RBP8.68□□□□□ -1.02
CASP4-213ENST00000534356 PRSS50Q9UI38 385 aa8.68□□□□□ -1.02
CASP4-213ENST00000534356 PCDHB6Q9Y5E3 794 aa8.68□□□□□ -1.02
CASP4-213ENST00000534356 A0A0A6YYK5 440 aaPredicted RBP8.67□□□□□ -1.02
CASP4-213ENST00000534356 MT-CO1P00395 513 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 RRADP55042 308 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 LGALS4P56470 323 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 KIAA2012Q0VF49 1180 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 USP10Q14694 798 aaKnown RBP8.67□□□□□ -1.02
CASP4-213ENST00000534356 PCOLCEQ15113 449 aa8.67□□□□□ -1.02
CASP4-213ENST00000534356 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms