RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 USP20Q9Y2K6 914 aa10.83□□□□□ -0.68
SSBP3-215ENST00000533946 H3BQ06 376 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-215ENST00000533946 MAFO75444 373 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-215ENST00000533946 ITGB1P05556 798 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 SFNP31947 248 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 MCM7P33993 719 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 BMPR1AP36894 532 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 LTBRP36941 435 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 TXKP42681 527 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 RBM25P49756 843 aaKnown RBP10.82□□□□□ -0.68
SSBP3-215ENST00000533946 FAM189BP81408 668 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 TBC1D8BQ0IIM8 1120 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 IL17AQ16552 155 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 ECM1Q16610 540 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 XKR3Q5GH77 459 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 TJAP1Q5JTD0 557 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 CLLU1OSQ5K130 101 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 C4orf32Q8N8J7 132 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 KLHL23Q8NBE8 558 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 ADAMTS19Q8TE59 1207 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 PIGOQ8TEQ8 1089 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 CLP1Q92989 425 aaKnown RBP10.82□□□□□ -0.68
SSBP3-215ENST00000533946 LXNQ9BS40 222 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 CWH43Q9H720 699 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 RGS18Q9NS28 235 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 SUCLA2Q9P2R7 463 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-215ENST00000533946 TCEAL9Q9UHQ7 104 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 RAPGEFL1Q9UHV5 662 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 WDFY4Q6ZS81 3184 aa10.82□□□□□ -0.68
SSBP3-215ENST00000533946 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 TBKBP1A7MCY6 615 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 M0QZ92 97 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 MED24O75448 989 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 SPATA31C1P0DKV0 1188 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 DARSP14868 501 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 EIF4BP23588 611 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 QARSP47897 775 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 SARSP49591 514 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 PSMC5P62195 406 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 HYAL1Q12794 435 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 EPHA7Q15375 998 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 CLUL1Q15846 466 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 RHPN2Q8IUC4 686 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 NPAS4Q8IUM7 802 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 TPH2Q8IWU9 490 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 RNF169Q8NCN4 708 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 SPPL3Q8TCT6 385 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 ASAP3Q8TDY4 903 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 PRPF31Q8WWY3 499 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 MRPL38Q96DV4 380 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 FAM20AQ96MK3 541 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 CASD1Q96PB1 797 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 HSD17B14Q9BPX1 270 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 EIF2AK1Q9BQI3 630 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 IFT122Q9HBG6 1241 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 GPRC5CQ9NQ84 441 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 CYP26B1Q9NR63 512 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 TYW1Q9NV66 732 aaKnown RBP10.81□□□□□ -0.68
SSBP3-215ENST00000533946 PLAGL2Q9UPG8 496 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 SQORQ9Y6N5 450 aa10.81□□□□□ -0.68
SSBP3-215ENST00000533946 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 DENND3A2RUS2 1198 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 PP2D1A8MPX8 630 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 MAGEB2O15479 319 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 SRGAP2CP0DJJ0 459 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 IL9P15248 144 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 KCNA5P22460 613 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 ERVFC1P60507 584 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 CALCRLQ16602 461 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 MAEAQ7L5Y9 396 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 ZNF598Q86UK7 904 aaKnown RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 CDR2LQ86X02 465 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 RDM1Q8NG50 284 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 ATXN2LQ8WWM7 1075 aaKnown RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 NLRP7Q8WX94 980 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 C8orf76Q96K31 380 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 FAM167AQ96KS9 214 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 CEP170P1Q96L14 293 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 NLRP4Q96MN2 994 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 CXCL16Q9H2A7 254 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 IGFLR1Q9H665 355 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 DHX33Q9H6R0 707 aaKnown RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 TTC12Q9H892 705 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-215ENST00000533946 CDH22Q9UJ99 828 aa10.8□□□□□ -0.68
SSBP3-215ENST00000533946 NT5C1B-RDH14C9J2C7 533 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 C5orf67F2Z3F1 127 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 PER2O15055 1255 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 EDN1P05305 212 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 P4HBP07237 508 aaKnown RBP10.79□□□□□ -0.68
SSBP3-215ENST00000533946 CDC25AP30304 524 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 HOXA11P31270 313 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-215ENST00000533946 YWHABP31946 246 aaKnown RBP10.79□□□□□ -0.68
SSBP3-215ENST00000533946 TECP42680 631 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 XKR9Q5GH70 373 aa10.79□□□□□ -0.68
SSBP3-215ENST00000533946 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms