RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ACTRT1Q8TDG2 376 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 MAGOHBQ96A72 148 aaKnown RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 DBNDD1Q9H9R9 158 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 BZW2Q9Y6E2 419 aaKnown RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 PITPNM2Q9BZ72 1349 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 TLDC2A0PJX2 215 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 BBOX1O75936 387 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 STAT1P42224 750 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 QPCTQ16769 361 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 CRY2Q49AN0 593 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 CERKLQ49MI3 558 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 NT5DC3Q86UY8 548 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 CD302Q8IX05 232 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 LRRC45Q96CN5 670 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 IRAK4Q9NWZ3 460 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 TMOD4Q9NZQ9 345 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 ZNF219Q9P2Y4 722 aaPredicted RBP20.99■□□□□ 0.95
CAPN1-226ENST00000533820 SWAP70Q9UH65 585 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 NRAPQ86VF7 1730 aa20.99■□□□□ 0.95
CAPN1-226ENST00000533820 H0YGN5 161 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 PDXKO00764 312 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 RGL2O15211 777 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 FAM13AO94988 1023 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 SF3B2Q13435 895 aaKnown RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 CUL1Q13616 776 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 FAM186BQ8IYM0 893 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 LENG9Q96B70 501 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 EIF2AK1Q9BQI3 630 aaKnown RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 TYW1Q9NV66 732 aaKnown RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 NFS1Q9Y697 457 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 RPL13P26373 211 aaKnown RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 DRAP1Q14919 205 aaPredicted RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 DNAJC12Q9UKB3 198 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 AMFRQ9UKV5 643 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 TGFB1I1O43294 461 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 CAND2O75155 1236 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 TBC1D10BQ4KMP7 808 aaPredicted RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 APOBEC3HQ6NTF7 200 aaKnown RBP20.98■□□□□ 0.95
CAPN1-226ENST00000533820 ARHGEF26Q96DR7 871 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 CYFIP2Q96F07 1278 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 ODF2LQ9ULJ1 636 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 ARFGEF1Q9Y6D6 1849 aa20.98■□□□□ 0.95
CAPN1-226ENST00000533820 SMCHD1A6NHR9 2005 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 F5H6K3 240 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 C21orf2O43822 256 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 KLRC3Q07444 240 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 EPM2AIP1Q7L775 607 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-226ENST00000533820 FBXO11Q86XK2 927 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 EME2A4GXA9 379 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-226ENST00000533820 PHF20L1A8MW92 1017 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 PPEF1O14829 653 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-226ENST00000533820 ICA1Q05084 483 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 DDR1Q08345 913 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 C10orf76Q5T2E6 689 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 ARMC3Q5W041 872 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 ZC3H3Q8IXZ2 948 aaKnown RBP20.97■□□□□ 0.95
CAPN1-226ENST00000533820 TEKT1Q969V4 418 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 AMNQ9BXJ7 453 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 TRIM6Q9C030 488 aaPredicted RBP20.97■□□□□ 0.95
CAPN1-226ENST00000533820 COL24A1Q17RW2 1714 aa20.97■□□□□ 0.95
CAPN1-226ENST00000533820 FAM107AO95990 144 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 CBWD6Q4V339 395 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 CBWD3Q5JTY5 395 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 CBWD5Q5RIA9 395 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 PKD2L1Q9P0L9 805 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 UTP11Q9Y3A2 253 aaKnown RBP20.96■□□□□ 0.95
CAPN1-226ENST00000533820 CFBP00751 764 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 KRT13P13646 458 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 ACTN3Q08043 901 aaPredicted RBP20.96■□□□□ 0.95
CAPN1-226ENST00000533820 SPRED3Q2MJR0 410 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 RINT1Q6NUQ1 792 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 CCDC26Q8TAB7 109 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 LMBR1Q8WVP7 490 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 ZKSCAN4Q969J2 545 aaPredicted RBP20.96■□□□□ 0.95
CAPN1-226ENST00000533820 ERVK-5Q9HDB9 667 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 A6NNZ2 444 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 TUBB8Q3ZCM7 444 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 TMC3Q7Z5M5 1100 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 NAP1L4Q99733 375 aaKnown RBP20.96■□□□□ 0.95
CAPN1-226ENST00000533820 THAP2Q9H0W7 228 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 MCM8Q9UJA3 840 aa20.96■□□□□ 0.95
CAPN1-226ENST00000533820 PLTPP55058 493 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 JAM2P57087 298 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 DCAF12L1Q5VU92 463 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 ZNF746Q6NUN9 644 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-226ENST00000533820 MICALCLQ6ZW33 695 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 CTNNBL1Q8WYA6 563 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-226ENST00000533820 DYDC2Q96IM9 177 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 SNX24Q9Y343 169 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 CYP3A7-CYP3A51PA0A087WV96 503 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 ZBTB48P10074 688 aaPredicted RBP20.95■□□□□ 0.94
CAPN1-226ENST00000533820 CYP3A7P24462 503 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 PRKCIP41743 596 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 NBPF9Q3BBW0 867 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 SIAH1Q8IUQ4 282 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 CABS1Q96KC9 395 aa20.95■□□□□ 0.94
CAPN1-226ENST00000533820 METTL14Q9HCE5 456 aaKnown RBP20.95■□□□□ 0.94
CAPN1-226ENST00000533820 GMNCA6NCL1 334 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 SHBGP04278 402 aa20.94■□□□□ 0.94
CAPN1-226ENST00000533820 SUCLA2Q9P2R7 463 aaPredicted RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms