RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 DBF4BQ8NFT6 615 aa22.04■■□□□ 1.12
CHEK1-215ENST00000533778 CLIC6Q96NY7 704 aa22.04■■□□□ 1.12
CHEK1-215ENST00000533778 PNMA5Q96PV4 448 aa22.04■■□□□ 1.12
CHEK1-215ENST00000533778 GCOM2Q9BZD3 368 aaPredicted RBP22.04■■□□□ 1.12
CHEK1-215ENST00000533778 ADAMTS10Q9H324 1103 aa22.04■■□□□ 1.12
CHEK1-215ENST00000533778 BMP2KQ9NSY1 1161 aaPredicted RBP22.04■■□□□ 1.12
CHEK1-215ENST00000533778 CIZ1Q9ULV3 898 aaPredicted RBP22.04■■□□□ 1.12
CHEK1-215ENST00000533778 CEP290O15078 2479 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 ZBBXA8MT70 800 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 E9PMD0 336 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 GPR182O15218 404 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 CUTAO60888 179 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 PAK2Q13177 524 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 GRB10Q13322 594 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 TMEM119Q4V9L6 283 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 RASIP1Q5U651 963 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 PRPF31Q8WWY3 499 aaKnown RBP22.03■■□□□ 1.12
CHEK1-215ENST00000533778 SYMPKQ92797 1274 aaKnown RBP22.03■■□□□ 1.12
CHEK1-215ENST00000533778 PPP1R16BQ96T49 567 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 OSMRQ99650 979 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 INO80BQ9C086 356 aaPredicted RBP22.03■■□□□ 1.12
CHEK1-215ENST00000533778 RCOR1Q9UKL0 485 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 COL4A3BPQ9Y5P4 624 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 SLC4A7Q9Y6M7 1214 aa22.03■■□□□ 1.12
CHEK1-215ENST00000533778 TRIP12Q14669 1992 aaPredicted RBP22.03■■□□□ 1.12
CHEK1-215ENST00000533778 RPS6KA5O75582 802 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 EIF4BP23588 611 aaKnown RBP22.02■■□□□ 1.12
CHEK1-215ENST00000533778 KCNJ6P48051 423 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 ME1P48163 572 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 TFDP1Q14186 410 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 LRIT3Q3SXY7 679 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 EPSTI1Q96J88 318 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 PLIN2Q99541 437 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 FTHL17Q9BXU8 183 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 SCAND2PQ9GZW5 306 aaPredicted RBP22.02■■□□□ 1.12
CHEK1-215ENST00000533778 CDHR5Q9HBB8 845 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 XPNPEP1Q9NQW7 623 aa22.02■■□□□ 1.12
CHEK1-215ENST00000533778 ARL2P36404 184 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 LAMTOR4Q0VGL1 99 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 KARSQ15046 597 aaKnown RBP22.01■■□□□ 1.11
CHEK1-215ENST00000533778 HABP4Q5JVS0 413 aaKnown RBP22.01■■□□□ 1.11
CHEK1-215ENST00000533778 SPECC1Q5M775 1068 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 PHOSPHO2Q8TCD6 241 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 NLRP4Q96MN2 994 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 TIPINQ9BVW5 301 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 AGO3Q9H9G7 860 aaKnown RBP22.01■■□□□ 1.11
CHEK1-215ENST00000533778 KCND2Q9NZV8 630 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 PADI3Q9ULW8 664 aa22.01■■□□□ 1.11
CHEK1-215ENST00000533778 A0A087WZ62 844 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 SSBP05455 408 aaKnown RBP eCLIP22■■□□□ 1.11
CHEK1-215ENST00000533778 PLA2G4BP0C869 781 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 DARSP14868 501 aaKnown RBP22■■□□□ 1.11
CHEK1-215ENST00000533778 CD52P31358 61 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 POU5F1BQ06416 359 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 NFX1Q12986 1120 aaKnown RBP22■■□□□ 1.11
CHEK1-215ENST00000533778 FAM102BQ5T8I3 360 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 CCDC73Q6ZRK6 1079 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 KCNK18Q7Z418 384 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 SYT2Q8N9I0 419 aaPredicted RBP22■■□□□ 1.11
CHEK1-215ENST00000533778 SPATA32Q96LK8 384 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 FDXACB1Q9BRP7 624 aaPredicted RBP22■■□□□ 1.11
CHEK1-215ENST00000533778 OSBPL7Q9BZF2 842 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 POLR3FQ9H1D9 316 aaPredicted RBP22■■□□□ 1.11
CHEK1-215ENST00000533778 NOC2LQ9Y3T9 749 aaKnown RBP22■■□□□ 1.11
CHEK1-215ENST00000533778 TANC1Q9C0D5 1861 aa22■■□□□ 1.11
CHEK1-215ENST00000533778 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.99■■□□□ 1.11
CHEK1-215ENST00000533778 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.99■■□□□ 1.11
CHEK1-215ENST00000533778 AMHP03971 560 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 SRGAP2CP0DJJ0 459 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 PLCG1P19174 1290 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 RRAGBQ5VZM2 374 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 USP49Q70CQ1 688 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 MAEAQ7L5Y9 396 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 KSR1Q8IVT5 923 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 TMEM40Q8WWA1 233 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 KIFAP3Q92845 792 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 SLC9A7Q96T83 725 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 ERVK-5Q9HDB9 667 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 CXXC1Q9P0U4 656 aaPredicted RBP21.99■■□□□ 1.11
CHEK1-215ENST00000533778 STK17AQ9UEE5 414 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 ST3GAL5Q9UNP4 418 aa21.99■■□□□ 1.11
CHEK1-215ENST00000533778 SFPQP23246 707 aaKnown RBP eCLIP21.98■■□□□ 1.11
CHEK1-215ENST00000533778 PHKA2P46019 1235 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 WDR5P61964 334 aaKnown RBP21.98■■□□□ 1.11
CHEK1-215ENST00000533778 RINT1Q6NUQ1 792 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 SRGAP1Q7Z6B7 1085 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 RNF149Q8NC42 400 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 LEO1Q8WVC0 666 aaPredicted RBP21.98■■□□□ 1.11
CHEK1-215ENST00000533778 RAD54LQ92698 747 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 ZNF668Q96K58 619 aaPredicted RBP21.98■■□□□ 1.11
CHEK1-215ENST00000533778 FAM13BQ9NYF5 915 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 KCNG1Q9UIX4 513 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 PCDHA7Q9UN72 937 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 WDR81Q562E7 1941 aa21.98■■□□□ 1.11
CHEK1-215ENST00000533778 ATP2A2P16615 1042 aaKnown RBP21.97■■□□□ 1.11
CHEK1-215ENST00000533778 GUCY2CP25092 1073 aa21.97■■□□□ 1.11
CHEK1-215ENST00000533778 SLC12A3P55017 1021 aa21.97■■□□□ 1.11
CHEK1-215ENST00000533778 PPP2R5AQ15172 486 aa21.97■■□□□ 1.11
CHEK1-215ENST00000533778 PCBP1Q15365 356 aaKnown RBP eCLIP21.97■■□□□ 1.11
CHEK1-215ENST00000533778 TCTN1Q2MV58 587 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms