RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 TMEM179Q6ZVK1 233 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 C16orf86Q6ZW13 317 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 DPP9Q86TI2 863 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.11□□□□□ -1.27
SOX6-216ENST00000533658 MYLIPQ8WY64 445 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 LIN37Q96GY3 246 aaPredicted RBP7.11□□□□□ -1.27
SOX6-216ENST00000533658 ZNF576Q9H609 170 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 GINM1Q9NU53 330 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 FAM105AQ9NUU6 356 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 DDX20Q9UHI6 824 aaKnown RBP7.11□□□□□ -1.27
SOX6-216ENST00000533658 ATP11BQ9Y2G3 1177 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 IVNS1ABPQ9Y6Y0 642 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 XIRP2A4UGR9 3374 aa7.11□□□□□ -1.27
SOX6-216ENST00000533658 BAZ2AQ9UIF9 1905 aaKnown RBP7.1□□□□□ -1.27
SOX6-216ENST00000533658 GSG1L2A8MUP6 293 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 DYNC1LI2O43237 492 aaPredicted RBP7.1□□□□□ -1.27
SOX6-216ENST00000533658 B3GALT4O96024 378 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 KRT1P04264 644 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 C1QTNF9P0C862 333 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 CYBAP13498 195 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 FOSL2P15408 326 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 MAPK1P28482 360 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 CCNA1P78396 465 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 AP3B2Q13367 1082 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 CYP27C1Q4G0S4 372 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 FAM47AQ5JRC9 791 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 LRRC47Q8N1G4 583 aaKnown RBP7.1□□□□□ -1.27
SOX6-216ENST00000533658 FAM181AQ8N9Y4 354 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 USP38Q8NB14 1042 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 LPAR1Q92633 364 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 STRBPQ96SI9 672 aaKnown RBP7.1□□□□□ -1.27
SOX6-216ENST00000533658 VCPKMTQ9H867 229 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 PRDM5Q9NQX1 630 aaPredicted RBP7.1□□□□□ -1.27
SOX6-216ENST00000533658 ATP8A2Q9NTI2 1148 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 TMX2Q9Y320 296 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 RIPK3Q9Y572 518 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 TACC3Q9Y6A5 838 aa7.1□□□□□ -1.27
SOX6-216ENST00000533658 CHD9Q3L8U1 2897 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 FRMPD3Q5JV73 1810 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 TMEM238LA0A1B0GVL6 79 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 GPAA1O43292 621 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 MSCO60682 206 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 PGK1P00558 417 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 IGHA2P01877 340 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 APPP05067 770 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 ITGB8P26012 769 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 ADCYAP1R1P41586 468 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 SMAD3P84022 425 aaKnown RBP7.09□□□□□ -1.27
SOX6-216ENST00000533658 UBE3CQ15386 1083 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 TRIM60Q495X7 471 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 RPS26P11Q5JNZ5 115 aaPredicted RBP7.09□□□□□ -1.27
SOX6-216ENST00000533658 SLC23A3Q6PIS1 610 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 DYMQ7RTS9 669 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 CERS3Q8IU89 383 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 CPXCR1Q8N123 301 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 MAML3Q96JK9 1138 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 YTHDC1Q96MU7 727 aaKnown RBP7.09□□□□□ -1.27
SOX6-216ENST00000533658 NRSN2Q9GZP1 204 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.09□□□□□ -1.27
SOX6-216ENST00000533658 PDLIM7Q9NR12 457 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 ECHDC1Q9NTX5 307 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 HOXC10Q9NYD6 342 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 CLIP2Q9UDT6 1046 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 SWAP70Q9UH65 585 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 ISY1Q9ULR0 285 aaKnown RBP7.09□□□□□ -1.27
SOX6-216ENST00000533658 CHD7Q9P2D1 2997 aa7.09□□□□□ -1.27
SOX6-216ENST00000533658 RLFQ13129 1914 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 TRIM43BA6NCK2 446 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 MYADML2A6NDP7 307 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 VWA5AO00534 786 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 FOXP2O15409 715 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 RNF113AO15541 343 aaKnown RBP7.08□□□□□ -1.28
SOX6-216ENST00000533658 NMT2O60551 498 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 EIF5BO60841 1220 aaKnown RBP7.08□□□□□ -1.28
SOX6-216ENST00000533658 GLRX3O76003 335 aaKnown RBP7.08□□□□□ -1.28
SOX6-216ENST00000533658 NDUFB10O96000 172 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 HOXC6P09630 235 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 TDO2P48775 406 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 PLCB3Q01970 1234 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 SNX17Q15036 470 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 VPS53Q5VIR6 699 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 DBX2Q6ZNG2 339 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 TMC7Q7Z402 723 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 KBTBD3Q8NAB2 608 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 REPS2Q8NFH8 660 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 BADQ92934 168 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 TRIM43Q96BQ3 446 aaPredicted RBP7.08□□□□□ -1.28
SOX6-216ENST00000533658 MMP19Q99542 508 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 DCTPP1Q9H773 170 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 MKNK2Q9HBH9 465 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 RAVER2Q9HCJ3 691 aaKnown RBP7.08□□□□□ -1.28
SOX6-216ENST00000533658 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 HOMER2Q9NSB8 354 aa7.08□□□□□ -1.28
SOX6-216ENST00000533658 NCOR1O75376 2440 aa7.07□□□□□ -1.28
SOX6-216ENST00000533658 TMEM265A0A087WTH1 108 aa7.07□□□□□ -1.28
SOX6-216ENST00000533658 KBTBD13C9JR72 458 aa7.07□□□□□ -1.28
SOX6-216ENST00000533658 F5H6K3 240 aa7.07□□□□□ -1.28
SOX6-216ENST00000533658 WDR46O15213 610 aaKnown RBP7.07□□□□□ -1.28
SOX6-216ENST00000533658 ADCY6O43306 1168 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms