RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 IER5Q5VY09 327 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 FAM126BQ8IXS8 530 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 DNAJB3Q8WWF6 145 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 TCP11Q8WWU5 503 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
COMMD9-208ENST00000533643 KIFAP3Q92845 792 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 WNT8BQ93098 351 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
COMMD9-208ENST00000533643 POLR3FQ9H1D9 316 aaPredicted RBP13.21□□□□□ -0.29
COMMD9-208ENST00000533643 SUCLA2Q9P2R7 463 aaPredicted RBP13.21□□□□□ -0.29
COMMD9-208ENST00000533643 HOOK1Q9UJC3 728 aaKnown RBP13.21□□□□□ -0.29
COMMD9-208ENST00000533643 ODF2LQ9ULJ1 636 aa13.21□□□□□ -0.29
COMMD9-208ENST00000533643 FRMD3A2A2Y4 597 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 SFI1A8K8P3 1242 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 KLRC4O43908 158 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TRAK2O60296 914 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 PQBP1O60828 265 aaKnown RBP13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TMOD1P28289 359 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 ZNF131P52739 623 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 RTP1P59025 263 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TLE2Q04725 743 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 PTK7Q13308 1070 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 BSNDQ8WZ55 320 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
COMMD9-208ENST00000533643 ERCC4Q92889 916 aaPredicted RBP13.2□□□□□ -0.3
COMMD9-208ENST00000533643 DRC1Q96MC2 740 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 NUP62CLQ9H1M0 184 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 TMEM63CQ9P1W3 806 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 NOD1Q9Y239 953 aa13.2□□□□□ -0.3
COMMD9-208ENST00000533643 LOXHD1Q8IVV2 1947 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 MROH7Q68CQ1 1323 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 PVALEFA0A1B0GWK0 134 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 TBCAO75347 108 aaKnown RBP13.19□□□□□ -0.3
COMMD9-208ENST00000533643 FAM13AO94988 1023 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 VTNP04004 478 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 RPN1P04843 607 aaKnown RBP13.19□□□□□ -0.3
COMMD9-208ENST00000533643 IDEP14735 1019 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 GLRA2P23416 452 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 LAMTOR4Q0VGL1 99 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 TRIM71Q2Q1W2 868 aaKnown RBP13.19□□□□□ -0.3
COMMD9-208ENST00000533643 CCDC183Q5T5S1 534 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 UNC13DQ70J99 1090 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 RPAINQ86UA6 219 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 NME8Q8N427 588 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 SPATA20Q8TB22 786 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 PSPC1Q8WXF1 523 aaKnown RBP13.19□□□□□ -0.3
COMMD9-208ENST00000533643 MAP7D2Q96T17 732 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 AKT3Q9Y243 479 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 ATP11BQ9Y2G3 1177 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 PCDHA5Q9Y5H7 936 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
COMMD9-208ENST00000533643 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
COMMD9-208ENST00000533643 ASAP2O43150 1006 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 SMC2O95347 1197 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 PLS3P13797 630 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 GAP43P17677 238 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 NPTX2P47972 431 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
COMMD9-208ENST00000533643 EHHADHQ08426 723 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 COASYQ13057 564 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 MXD4Q14582 209 aaPredicted RBP13.18□□□□□ -0.3
COMMD9-208ENST00000533643 HERC4Q5GLZ8 1057 aaPredicted RBP13.18□□□□□ -0.3
COMMD9-208ENST00000533643 CAVIN1Q6NZI2 390 aaKnown RBP13.18□□□□□ -0.3
COMMD9-208ENST00000533643 SFR1Q86XK3 245 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 RHPN2Q8IUC4 686 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 CCDC65Q8IXS2 484 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 MYCT1Q8N699 235 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 ADAMTS10Q9H324 1103 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 C17orf75Q9HAS0 396 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
COMMD9-208ENST00000533643 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
COMMD9-208ENST00000533643 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 GPR32O75388 356 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 RPLP2P05387 115 aaKnown RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 SRGAP2CP0DJJ0 459 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 THPOP40225 353 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 GPC3P51654 580 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 PEX3P56589 373 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 NLRP11P59045 1033 aaKnown RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 MRPS6P82932 125 aaKnown RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 CAPSQ13938 189 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 KIZQ2M2Z5 673 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 KMT5BQ4FZB7 885 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 NT5DC1Q5TFE4 455 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
COMMD9-208ENST00000533643 RSPH3Q86UC2 560 aa13.17□□□□□ -0.3
COMMD9-208ENST00000533643 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms