RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CD52P31358 61 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 KARSQ15046 597 aaKnown RBP13.34□□□□□ -0.27
SSBP3-214ENST00000533209 PADI6Q6TGC4 694 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 RHPN2Q8IUC4 686 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 KCTD17Q8N5Z5 321 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 PRPF31Q8WWY3 499 aaKnown RBP13.34□□□□□ -0.27
SSBP3-214ENST00000533209 PSPC1Q8WXF1 523 aaKnown RBP13.34□□□□□ -0.27
SSBP3-214ENST00000533209 SEPT8Q92599 483 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
SSBP3-214ENST00000533209 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 OSMRQ99650 979 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 IFIH1Q9BYX4 1025 aaKnown RBP13.34□□□□□ -0.27
SSBP3-214ENST00000533209 CCSER1Q9C0I3 900 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 RCOR1Q9UKL0 485 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 NOC2LQ9Y3T9 749 aaKnown RBP13.34□□□□□ -0.27
SSBP3-214ENST00000533209 COL4A3BPQ9Y5P4 624 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 EVPLQ92817 2033 aa13.34□□□□□ -0.27
SSBP3-214ENST00000533209 ABHD14A-ACY1A0A1B0GW23 586 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 ZBBXA8MT70 800 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 CYP11B2P19099 503 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 EIF4BP23588 611 aaKnown RBP13.33□□□□□ -0.28
SSBP3-214ENST00000533209 ARL2P36404 184 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 NUCB2P80303 420 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 CDC42EP1Q00587 391 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 IKBKEQ14164 716 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 LRIT3Q3SXY7 679 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 AXDND1Q5T1B0 1012 aaPredicted RBP13.33□□□□□ -0.28
SSBP3-214ENST00000533209 KSR1Q8IVT5 923 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 NLRP7Q8WX94 980 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 APBB2Q92870 758 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 MTIF3Q9H2K0 278 aaKnown RBP13.33□□□□□ -0.28
SSBP3-214ENST00000533209 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 PADI3Q9ULW8 664 aa13.33□□□□□ -0.28
SSBP3-214ENST00000533209 SIP14410 1827 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 A0A087WZ62 844 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 SOX1O00570 391 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-214ENST00000533209 CUTAO60888 179 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 DARSP14868 501 aaKnown RBP13.32□□□□□ -0.28
SSBP3-214ENST00000533209 PLCG1P19174 1290 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 WDR5P61964 334 aaKnown RBP13.32□□□□□ -0.28
SSBP3-214ENST00000533209 PAK2Q13177 524 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 FAM109BQ6ICB4 259 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-214ENST00000533209 MAEAQ7L5Y9 396 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 ZNF410Q86VK4 478 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 FAM228AQ86W67 206 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 SYT2Q8N9I0 419 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-214ENST00000533209 MCPH1Q8NEM0 835 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 ASAP3Q8TDY4 903 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 SCLT1Q96NL6 688 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 FDXACB1Q9BRP7 624 aaPredicted RBP13.32□□□□□ -0.28
SSBP3-214ENST00000533209 RUSC1Q9BVN2 902 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 IFT122Q9HBG6 1241 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 ERVK-5Q9HDB9 667 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 GPRC5CQ9NQ84 441 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 TSHZ2Q9NRE2 1034 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 BLOC1S4Q9NUP1 217 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 MYH15Q9Y2K3 1946 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
SSBP3-214ENST00000533209 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 ASAP2O43150 1006 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 EFCAB14O75071 495 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 PLA2G4BP0C869 781 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 SRGAP2CP0DJJ0 459 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 GLRA2P23416 452 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 ME1P48163 572 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 SLC12A3P55017 1021 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 KRT85P78386 507 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 CAPSQ13938 189 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 MXD4Q14582 209 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 FAM102BQ5T8I3 360 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 C1orf186Q6ZWK4 172 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 RTN4RL1Q86UN2 441 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 LEO1Q8WVC0 666 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 LINC01599Q8WXQ3 324 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 NLRP4Q96MN2 994 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 GCOM2Q9BZD3 368 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 POLR3FQ9H1D9 316 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-214ENST00000533209 TMX1Q9H3N1 280 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 PCDHA7Q9UN72 937 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 ST3GAL5Q9UNP4 418 aa13.31□□□□□ -0.28
SSBP3-214ENST00000533209 A0A087X0B3 334 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-214ENST00000533209 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.3□□□□□ -0.28
SSBP3-214ENST00000533209 GRXCR1A8MXD5 290 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 GPR182O15218 404 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 MGEA5O60502 916 aa13.3□□□□□ -0.28
SSBP3-214ENST00000533209 ATP2A2P16615 1042 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms