RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 EBF2Q9HAK2 575 aa16.05■□□□□ 0.16
CAPN1-224ENST00000533129 LRRC4CQ9HCJ2 640 aa16.05■□□□□ 0.16
CAPN1-224ENST00000533129 ATP8A1Q9Y2Q0 1164 aa16.05■□□□□ 0.16
CAPN1-224ENST00000533129 CETN3O15182 167 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 EDIL3O43854 480 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 H2AFZP0C0S5 128 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 CHN1P15882 459 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 CRKP46108 304 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 SCNN1DP51172 638 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 ADAM9Q13443 819 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 ECM1Q16610 540 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 HYIQ5T013 277 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 H2AFVQ71UI9 128 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 VPS36Q86VN1 386 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 SCFD1Q8WVM8 642 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 CCDC134Q9H6E4 229 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 USP40Q9NVE5 1235 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 RTN2O75298 545 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 CDK8P49336 464 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 PTENP60484 403 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 PTPROQ16827 1216 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 ZDHHC15Q96MV8 337 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 NT5C3AQ9H0P0 336 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 BAIAP2L1Q9UHR4 511 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 DIS3Q9Y2L1 958 aaKnown RBP16.04■□□□□ 0.16
CAPN1-224ENST00000533129 ACTN1P12814 892 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 DPEP1P16444 411 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 USP17L2Q6R6M4 530 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 DAAM2Q86T65 1068 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 SLC44A5Q8NCS7 719 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 EPB41L4BQ9H329 900 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 PABPC3Q9H361 631 aaKnown RBP16.04■□□□□ 0.16
CAPN1-224ENST00000533129 EMILIN3Q9NT22 766 aa16.04■□□□□ 0.16
CAPN1-224ENST00000533129 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-224ENST00000533129 KCNA3P22001 575 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 ADCY7P51828 1080 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 APOBEC3HQ6NTF7 200 aaKnown RBP16.03■□□□□ 0.16
CAPN1-224ENST00000533129 FRMD5Q7Z6J6 570 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 NEK9Q8TD19 979 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 TRIM51Q9BSJ1 452 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 ZDHHC18Q9NUE0 388 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 SAMD15Q9P1V8 674 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 AFPP02771 609 aaKnown RBP16.03■□□□□ 0.16
CAPN1-224ENST00000533129 SLC9A1P19634 815 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 PICALMQ13492 652 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 DUPD1Q68J44 220 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 CDC42EP5Q6NZY7 148 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 CROCCP2Q86T23 111 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 RBM46Q8TBY0 533 aaKnown RBP16.03■□□□□ 0.16
CAPN1-224ENST00000533129 FAM212AQ96EL1 285 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
CAPN1-224ENST00000533129 ADAM7Q9H2U9 754 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 RIOX1Q9H6W3 641 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 BATF3Q9NR55 127 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 AMFRQ9UKV5 643 aa16.03■□□□□ 0.16
CAPN1-224ENST00000533129 SCN9AQ15858 1988 aa16.02■□□□□ 0.16
CAPN1-224ENST00000533129 PON1P27169 355 aa16.02■□□□□ 0.16
CAPN1-224ENST00000533129 EXOC3L4Q17RC7 722 aa16.02■□□□□ 0.16
CAPN1-224ENST00000533129 KIAA0825Q8IV33 1275 aa16.02■□□□□ 0.16
CAPN1-224ENST00000533129 VAT1LQ9HCJ6 419 aa16.02■□□□□ 0.16
CAPN1-224ENST00000533129 ADAMTSL1Q8N6G6 1762 aa16.02■□□□□ 0.16
CAPN1-224ENST00000533129 FAM187AA6NFU0 413 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 FGGP02679 453 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 PAX7P23759 505 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 NR2F2P24468 414 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 PMS2P54278 862 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 DR1Q01658 176 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 SLMAPQ14BN4 828 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 ACCSLQ4AC99 568 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 HERC4Q5GLZ8 1057 aaPredicted RBP16.02■□□□□ 0.15
CAPN1-224ENST00000533129 DENND2CQ68D51 928 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 TRPM8Q7Z2W7 1104 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 NEDD1Q8NHV4 660 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 TBC1D31Q96DN5 1066 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 NAP1L3Q99457 506 aaPredicted RBP16.02■□□□□ 0.15
CAPN1-224ENST00000533129 SELENOSQ9BQE4 189 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 ERP44Q9BS26 406 aa16.02■□□□□ 0.15
CAPN1-224ENST00000533129 NSRP1Q9H0G5 558 aaKnown RBP16.02■□□□□ 0.15
CAPN1-224ENST00000533129 ARMCX3Q9UH62 379 aaPredicted RBP16.02■□□□□ 0.15
CAPN1-224ENST00000533129 SHBGP04278 402 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 POLD1P28340 1107 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 JAM2P57087 298 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 TGFB2P61812 414 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 DDX4Q9NQI0 724 aaKnown RBP16.01■□□□□ 0.15
CAPN1-224ENST00000533129 SERPINA10Q9UK55 444 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 NCANO14594 1321 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 FRMD3A2A2Y4 597 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 PPP1R12BO60237 982 aaPredicted RBP16.01■□□□□ 0.15
CAPN1-224ENST00000533129 GFPT2O94808 682 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 AGTP01019 485 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 DRG2P55039 364 aaKnown RBP16.01■□□□□ 0.15
CAPN1-224ENST00000533129 SATB1Q01826 763 aa16.01■□□□□ 0.15
CAPN1-224ENST00000533129 KLRC3Q07444 240 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms