RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 SLC24A5Q71RS6 500 aa33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 EIF2AK1Q9BQI3 630 aaKnown RBP33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 SUCLA2Q9P2R7 463 aaPredicted RBP33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 PCDHB7Q9Y5E2 793 aa33.91■■■■□ 3.02
SSSCA1-207ENST00000533115 RALGAPA2Q2PPJ7 1873 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 H3BNC9 293 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 SLITRK3O94933 977 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 LINC00271P0C7V0 271 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 DSC3Q14574 896 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 OTUD6AQ7L8S5 288 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 TPH2Q8IWU9 490 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 EXOC8Q8IYI6 725 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 CMTR2Q8IYT2 770 aaKnown RBP33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 ZNF579Q8NAF0 562 aaKnown RBP33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 CLP1Q92989 425 aaKnown RBP33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 TMEM60Q9H2L4 133 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 RNF216Q9NWF9 866 aaPredicted RBP33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 RWDD3Q9Y3V2 267 aa33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 SPTBN5Q9NRC6 3674 aaKnown RBP33.9■■■■□ 3.02
SSSCA1-207ENST00000533115 C9IYK1 514 aa33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 IBSPP21815 317 aaPredicted RBP33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 GPM6BQ13491 265 aa33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 SKIV2LQ15477 1246 aaKnown RBP33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 NOSTRINQ8IVI9 506 aa33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 ATXN2LQ8WWM7 1075 aaKnown RBP33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 SLC7A3Q8WY07 619 aa33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 TMX3Q96JJ7 454 aa33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 HSD17B14Q9BPX1 270 aa33.89■■■■□ 3.02
SSSCA1-207ENST00000533115 CD2BP2O95400 341 aaKnown RBP33.88■■■■□ 3.01
SSSCA1-207ENST00000533115 CTNNB1P35222 781 aa33.88■■■■□ 3.01
SSSCA1-207ENST00000533115 BMPR1AP36894 532 aa33.88■■■■□ 3.01
SSSCA1-207ENST00000533115 NEK9Q8TD19 979 aa33.88■■■■□ 3.01
SSSCA1-207ENST00000533115 GCOM2Q9BZD3 368 aaPredicted RBP33.88■■■■□ 3.01
SSSCA1-207ENST00000533115 DHX33Q9H6R0 707 aaKnown RBP33.88■■■■□ 3.01
SSSCA1-207ENST00000533115 C5orf67F2Z3F1 127 aa33.87■■■■□ 3.01
SSSCA1-207ENST00000533115 RFC5P40937 340 aa33.87■■■■□ 3.01
SSSCA1-207ENST00000533115 POLGP54098 1239 aaPredicted RBP33.87■■■■□ 3.01
SSSCA1-207ENST00000533115 FAM189BP81408 668 aa33.87■■■■□ 3.01
SSSCA1-207ENST00000533115 ORC2Q13416 577 aaPredicted RBP33.87■■■■□ 3.01
SSSCA1-207ENST00000533115 RHPN2Q8IUC4 686 aa33.87■■■■□ 3.01
SSSCA1-207ENST00000533115 VCANP13611 3396 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 ZBTB39O15060 712 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 RB1P06400 928 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 ZSCAN20P17040 1043 aaPredicted RBP33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 MCM2P49736 904 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 ZNF174Q15697 407 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 PTPROQ16827 1216 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 ZNF410Q86VK4 478 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 COL25A1Q9BXS0 654 aaPredicted RBP33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 KIF3AQ9Y496 699 aa33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 MRPL42Q9Y6G3 142 aaKnown RBP33.86■■■■□ 3.01
SSSCA1-207ENST00000533115 A0A087WZ62 844 aa33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 LYPLA2O95372 231 aa33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 FGFR4P22455 802 aa33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 GATMP50440 423 aa33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 PAN2Q504Q3 1202 aaKnown RBP33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 XKR9Q5GH70 373 aa33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 TTC38Q5R3I4 469 aa33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 MRPL38Q96DV4 380 aaKnown RBP33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 FDXACB1Q9BRP7 624 aaPredicted RBP33.85■■■■□ 3.01
SSSCA1-207ENST00000533115 CSDE1O75534 798 aaKnown RBP33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 U2AF2P26368 475 aaKnown RBP eCLIP33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 TRAPPC10P48553 1259 aa33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 TJAP1Q5JTD0 557 aa33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 KSR1Q8IVT5 923 aa33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 C11orf84Q9BUA3 381 aaPredicted RBP33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 ELAC1Q9H777 363 aaKnown RBP33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 TMEM161AQ9NX61 479 aa33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 NOL7Q9UMY1 257 aaKnown RBP33.84■■■■□ 3.01
SSSCA1-207ENST00000533115 CUL9Q8IWT3 2517 aa33.83■■■■□ 3.01
SSSCA1-207ENST00000533115 POTEMA6NI47 508 aa33.83■■■■□ 3.01
SSSCA1-207ENST00000533115 MRPS5P82675 430 aaKnown RBP33.83■■■■□ 3.01
SSSCA1-207ENST00000533115 NLRP4Q96MN2 994 aa33.83■■■■□ 3.01
SSSCA1-207ENST00000533115 INO80BQ9C086 356 aaPredicted RBP33.83■■■■□ 3.01
SSSCA1-207ENST00000533115 ATP6V0A4Q9HBG4 840 aa33.83■■■■□ 3.01
SSSCA1-207ENST00000533115 GAS2O43903 313 aaKnown RBP33.82■■■■□ 3
SSSCA1-207ENST00000533115 OR52Z1P0C646 297 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 EMC2Q15006 297 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 FAM102BQ5T8I3 360 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 TMEM143Q96AN5 459 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 ASB2Q96Q27 587 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 PLVAPQ9BX97 442 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 BMP2KQ9NSY1 1161 aaPredicted RBP33.82■■■■□ 3
SSSCA1-207ENST00000533115 ANKEF1Q9NU02 776 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 COL4A3BPQ9Y5P4 624 aa33.82■■■■□ 3
SSSCA1-207ENST00000533115 SFPQP23246 707 aaKnown RBP eCLIP33.81■■■■□ 3
SSSCA1-207ENST00000533115 TCP11Q8WWU5 503 aa33.81■■■■□ 3
SSSCA1-207ENST00000533115 PRPF31Q8WWY3 499 aaKnown RBP33.81■■■■□ 3
SSSCA1-207ENST00000533115 PSPC1Q8WXF1 523 aaKnown RBP33.81■■■■□ 3
SSSCA1-207ENST00000533115 COG5Q9UP83 839 aa33.81■■■■□ 3
SSSCA1-207ENST00000533115 ARID2Q68CP9 1835 aa33.81■■■■□ 3
SSSCA1-207ENST00000533115 TBKBP1A7MCY6 615 aa33.8■■■■□ 3
SSSCA1-207ENST00000533115 TECP42680 631 aa33.8■■■■□ 3
SSSCA1-207ENST00000533115 SYMPKQ92797 1274 aaKnown RBP33.8■■■■□ 3
SSSCA1-207ENST00000533115 CHST12Q9NRB3 414 aa33.8■■■■□ 3
SSSCA1-207ENST00000533115 XIRP2A4UGR9 3374 aa33.8■■■■□ 3
SSSCA1-207ENST00000533115 MTRQ99707 1265 aa33.79■■■■□ 3
SSSCA1-207ENST00000533115 IFT122Q9HBG6 1241 aa33.79■■■■□ 3
SSSCA1-207ENST00000533115 FNDC1Q4ZHG4 1894 aaPredicted RBP33.79■■■■□ 3
SSSCA1-207ENST00000533115 SPATA31C1P0DKV0 1188 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms