RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CYP3A7-CYP3A51PA0A087WV96 503 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 CCDC194A0A1B0GVG4 234 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 DDX11L8A8MPP1 907 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 M0R2N6 131 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 MBTPS2O43462 519 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 GPR37L1O60883 481 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 TBX10O75333 385 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 ALADP13716 330 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 XBP1P17861 261 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 FGFR4P22455 802 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 CYP3A7P24462 503 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 DNM2P50570 870 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 GPC3P51654 580 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 FAM189BP81408 668 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 ZP2Q05996 745 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 SCRN1Q12765 414 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 DSC3Q14574 896 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 XKR3Q5GH77 459 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 KRT25Q7Z3Z0 450 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 ADHFE1Q8IWW8 467 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 LINC01465Q8N7H1 131 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 COLGALT1Q8NBJ5 622 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 TLR9Q9NR96 1032 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 HCN4Q9Y3Q4 1203 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 PCDHGC5Q9Y5F6 944 aa20.04■□□□□ 0.8
PCF11-206ENST00000533018 TMEM150BA6NC51 233 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 HOXA2O43364 376 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 FGF18O76093 207 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 LAG3P18627 525 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 CSPP1Q1MSJ5 1256 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 FAM177A1Q8N128 213 aaPredicted RBP20.03■□□□□ 0.8
PCF11-206ENST00000533018 EFHBQ8N7U6 833 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 TLE6Q9H808 572 aa20.03■□□□□ 0.8
PCF11-206ENST00000533018 PER2O15055 1255 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 MARCH6O60337 910 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 DTNBO60941 627 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 CSDE1O75534 798 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 DARSP14868 501 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 UBE3AQ05086 875 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 DRP2Q13474 957 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 SMAD4Q13485 552 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 TARBP2Q15633 366 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 NPY5RQ15761 445 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 SMAD2Q15796 467 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 MOXD1Q6UVY6 613 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 ETNPPLQ8TBG4 499 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 FAM122AQ96E09 287 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 POP1Q99575 1024 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 PHF20Q9BVI0 1012 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 NIFKQ9BYG3 293 aaKnown RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 GCOM2Q9BZD3 368 aaPredicted RBP20.02■□□□□ 0.8
PCF11-206ENST00000533018 TMEM117Q9H0C3 514 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 CWH43Q9H720 699 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 C11orf16Q9NQ32 467 aa20.02■□□□□ 0.8
PCF11-206ENST00000533018 SLC37A4O43826 429 aa20.01■□□□□ 0.79
PCF11-206ENST00000533018 ECHDC2Q86YB7 292 aa20.01■□□□□ 0.79
PCF11-206ENST00000533018 CASD1Q96PB1 797 aa20.01■□□□□ 0.79
PCF11-206ENST00000533018 DACT1Q9NYF0 836 aa20.01■□□□□ 0.79
PCF11-206ENST00000533018 PUF60Q9UHX1 559 aaKnown RBP20.01■□□□□ 0.79
PCF11-206ENST00000533018 TRIOO75962 3097 aa20.01■□□□□ 0.79
PCF11-206ENST00000533018 A0A087WZ62 844 aa20■□□□□ 0.79
PCF11-206ENST00000533018 DCXO43602 365 aa20■□□□□ 0.79
PCF11-206ENST00000533018 CCNT1O60563 726 aaKnown RBP20■□□□□ 0.79
PCF11-206ENST00000533018 ERVFC1P60507 584 aa20■□□□□ 0.79
PCF11-206ENST00000533018 PSMC5P62195 406 aa20■□□□□ 0.79
PCF11-206ENST00000533018 CDC42EP1Q00587 391 aa20■□□□□ 0.79
PCF11-206ENST00000533018 PIK3AP1Q6ZUJ8 805 aa20■□□□□ 0.79
PCF11-206ENST00000533018 NEK8Q86SG6 692 aa20■□□□□ 0.79
PCF11-206ENST00000533018 RHPN2Q8IUC4 686 aa20■□□□□ 0.79
PCF11-206ENST00000533018 LRRC43Q8N309 656 aa20■□□□□ 0.79
PCF11-206ENST00000533018 MBOAT7Q96N66 472 aa20■□□□□ 0.79
PCF11-206ENST00000533018 FDXACB1Q9BRP7 624 aaPredicted RBP20■□□□□ 0.79
PCF11-206ENST00000533018 SUCLA2Q9P2R7 463 aaPredicted RBP20■□□□□ 0.79
PCF11-206ENST00000533018 TPCN1Q9ULQ1 816 aa20■□□□□ 0.79
PCF11-206ENST00000533018 BARX2Q9UMQ3 279 aaPredicted RBP20■□□□□ 0.79
PCF11-206ENST00000533018 PFKFB2O60825 505 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 PBX3P40426 434 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 KRT17Q04695 432 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 ANKRD1Q15327 319 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 PLPP4Q5VZY2 271 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 PLA2G4FQ68DD2 849 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 KCNT2Q6UVM3 1135 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 B3GNT9Q6UX72 402 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 LRRC55Q6ZSA7 311 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 HELQQ8TDG4 1101 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 ZNF558Q96NG5 402 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 ENTPD7Q9NQZ7 604 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 GJB4Q9NTQ9 266 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 CLEC1BQ9P126 229 aa19.99■□□□□ 0.79
PCF11-206ENST00000533018 A0A0U1RQF3 1178 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 C19orf67A6NJJ6 358 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 EML1O00423 815 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 STBD1O95210 358 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 EOMESO95936 686 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 SFPQP23246 707 aaKnown RBP eCLIP19.98■□□□□ 0.79
PCF11-206ENST00000533018 QARSP47897 775 aaKnown RBP19.98■□□□□ 0.79
PCF11-206ENST00000533018 PDE12Q6L8Q7 609 aaKnown RBP19.98■□□□□ 0.79
PCF11-206ENST00000533018 MRPS27Q92552 414 aaKnown RBP19.98■□□□□ 0.79
PCF11-206ENST00000533018 WASF1Q92558 559 aa19.98■□□□□ 0.79
PCF11-206ENST00000533018 MSLNLQ96KJ4 702 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms