RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 GLTPD2A6NH11 291 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 SPECC1L-ADORA2AF8WAN1 911 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 CHMP2AO43633 222 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 FMNL1O95466 1100 aaPredicted RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 PDIA3P30101 505 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 FANCBQ8NB91 859 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 UHMK1Q8TAS1 419 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 RAPGEF5Q92565 580 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 TMEM47Q9BQJ4 181 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 DHX36Q9H2U1 1008 aaKnown RBP7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 GGT7Q9UJ14 662 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 ANGPTL2Q9UKU9 493 aa7.32□□□□□ -1.24
TGFBR3-209ENST00000532540 PXDNLA1KZ92 1463 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 PCNTO95613 3336 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 PDE4DIPQ5VU43 2346 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 SMNDC1O75940 238 aaKnown RBP eCLIP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 SCNN1BP51168 640 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ITIH3Q06033 890 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 EHHADHQ08426 723 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 NR1I3Q14994 352 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 LETM2Q2VYF4 491 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ZNF449Q6P9G9 518 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 HHIPL2Q6UWX4 724 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 MAEAQ7L5Y9 396 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 GSDMBQ8TAX9 411 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ZNF384Q8TF68 577 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 STAMQ92783 540 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 PIGSQ96S52 555 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 NHEJ1Q9H9Q4 299 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 UTP6Q9NYH9 597 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 IVNS1ABPQ9Y6Y0 642 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 F5H6K3 240 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ABLIM1O14639 778 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 RGL2O15211 777 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 TTLL1O95922 423 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 RFC5P40937 340 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 FXR1P51114 621 aaKnown RBP eCLIP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 KLRC3Q07444 240 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 KRT31Q15323 416 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 AGBL2Q5U5Z8 902 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ENAHQ8N8S7 591 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 AENQ8WTP8 325 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.31□□□□□ -1.249e-7■■■■■ 54.9
TGFBR3-209ENST00000532540 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 GSDMAQ96QA5 445 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 SIKE1Q9BRV8 207 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 RAVER2Q9HCJ3 691 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 DMAP1Q9NPF5 467 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 TRIM10Q9UDY6 481 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 FAM198AQ9UFP1 575 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 USP15Q9Y4E8 981 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 CASQ2O14958 399 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 NOL3O60936 208 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ASNSP08243 561 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ACADSP16219 412 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 MCM7P33993 719 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 CARSP49589 748 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 VPS41P49754 854 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 COPS2P61201 443 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 IRX4P78413 519 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 KIF23Q02241 960 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 RIPK1Q13546 671 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ITIH4Q14624 930 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 NFRKBQ6P4R8 1299 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 APOA5Q6Q788 366 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 PPP1R21Q6ZMI0 780 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 PIK3AP1Q6ZUJ8 805 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 APOBEC3FQ8IUX4 373 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 GPIHBP1Q8IV16 184 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 FOXP4Q8IVH2 680 aaPredicted RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 DIS3L2Q8IYB7 885 aaKnown RBP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 AGGF1Q8N302 714 aaeCLIP7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 TMTC2Q8N394 836 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 NEK9Q8TD19 979 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 C7orf43Q8WVR3 580 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 ZDHHC15Q96MV8 337 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 NDNQ99608 321 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 KANSL2Q9H9L4 492 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 GINS2Q9Y248 185 aa7.31□□□□□ -1.24
TGFBR3-209ENST00000532540 RTL9Q8NET4 1388 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 ZBED6P86452 979 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 ZNF174Q15697 407 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 PPP2R5EQ16537 467 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 SLC5A9Q2M3M2 681 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 TTMPQ5BVD1 217 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 RRAGAQ7L523 313 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 ANKRD35Q8N283 1001 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 FAM151AQ8WW52 585 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 CATSPER2Q96P56 530 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 TRAPPC9Q96Q05 1148 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 ALDH8A1Q9H2A2 487 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 DNAAF2Q9NVR5 837 aaKnown RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 UBAP1Q9NZ09 502 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 TMCO1Q9UM00 188 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 ARL2BPQ9Y2Y0 163 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 COL22A1Q8NFW1 1626 aaPredicted RBP7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 BRWD3Q6RI45 1802 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 DYTNA2CJ06 578 aa7.3□□□□□ -1.24
TGFBR3-209ENST00000532540 MAPK13O15264 365 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms