RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KIF2CQ99661 725 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 IER2Q9BTL4 223 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 SEZ6LQ9BYH1 1024 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 ANO3Q9BYT9 981 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 CCDC113Q9H0I3 377 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 TSPAN10Q9H1Z9 355 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 MLXIPQ9HAP2 919 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 IL21Q9HBE4 155 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 SH3GLB2Q9NR46 395 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 LCTP09848 1927 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 LRRC37A2A6NM11 1700 aa6.56□□□□□ -1.36
HMGB1P42-201ENST00000532126 SMCHD1A6NHR9 2005 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 TMEM229AB2RXF0 380 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 NOP56O00567 594 aaKnown RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 TLR3O15455 904 aaKnown RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 CAND2O75155 1236 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 CTDNEP1O95476 244 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 PDGFAP04085 211 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 CLTBP09497 229 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 SREBF1P36956 1147 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 MASP1P48740 699 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 CDK7P50613 346 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 SH3BP2P78314 561 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 RABEP1Q15276 862 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 HSDL1Q3SXM5 330 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 CEP55Q53EZ4 464 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 GALNT17Q6IS24 598 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 METTL7BQ6UX53 244 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 CPLX3Q8WVH0 158 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 EDEM1Q92611 657 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZSCAN31Q96LW9 406 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 AIFM3Q96NN9 605 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 LBHD1Q9BQE6 289 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 SENP7Q9BQF6 1050 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 MXRA8Q9BRK3 442 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 C2orf49Q9BVC5 232 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 JADE2Q9NQC1 790 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 PDLIM7Q9NR12 457 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 TMEM39AQ9NV64 488 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM13BQ9NYF5 915 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 ORC3Q9UBD5 711 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 PRKAG3Q9UGI9 489 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 PCDHA4Q9UN74 947 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 UBIAD1Q9Y5Z9 338 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 FRMPD3Q5JV73 1810 aa6.55□□□□□ -1.36
HMGB1P42-201ENST00000532126 GRIN2DO15399 1336 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 BAZ2BQ9UIF8 2168 aaKnown RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 A0A1W2PRU2 124 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 TRIM43BA6NCK2 446 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 MEIS1O00470 390 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 KIAA0355O15063 1070 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ADAMTS3O15072 1205 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 DTNBO60941 627 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ATP9AO75110 1047 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 CYP3A4P08684 503 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 SUPT20HL2P0C7V6 817 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ZNF286BP0CG31 522 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 KCNA2P16389 499 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 PAX3P23760 479 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ETFBP38117 255 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 MAGEA10P43363 369 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 GDF10P55107 478 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 SP4Q02446 784 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAAP100Q0VG06 881 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ORC1Q13415 861 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 HLTFQ14527 1009 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM47CQ5HY64 1035 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 NFRKBQ6P4R8 1299 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 CYFIP1Q7L576 1253 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ATCAYQ86WG3 371 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 BLIDQ8IZY5 108 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 SYNPOQ8N3V7 929 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 C7orf31Q8N865 590 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 DAGLBQ8NCG7 672 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 NSUN7Q8NE18 718 aaKnown RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 CYP2W1Q8TAV3 490 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 TRIM43Q96BQ3 446 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 TBC1D32Q96NH3 1257 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 SDF4Q9BRK5 362 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 ALG1Q9BT22 464 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 PHF20Q9BVI0 1012 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 KATNAL1Q9BW62 490 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 TRPV6Q9H1D0 765 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 BCAS3Q9H6U6 928 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 SH2B1Q9NRF2 756 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 KCNH7Q9NS40 1196 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 PKD2L1Q9P0L9 805 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 KCNJ14Q9UNX9 436 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 EFR3BQ9Y2G0 817 aa6.54□□□□□ -1.36
HMGB1P42-201ENST00000532126 MCM3APO60318 1980 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 MYH6P13533 1939 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 ESYT3A0FGR9 886 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM221BA6H8Z2 402 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 FAM86B1E9PN63 330 aa6.53□□□□□ -1.36
HMGB1P42-201ENST00000532126 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms